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Nucleic atom dist Protein atom
DT5:H.OP1/1 2.3 SER166:G.OG/1
DT5:H.OP2/1 2.62 LEU167:G.N/1
DG6:H.OP2/1 2.82 THR150:G.OG1/1
DG6:H.OP2/1 2.76 HIS152:G.NE2/1
DG6:H.N7/1 3.15 ARG124:G.NH2/1
DG6:H.O6/1 2.8 ARG124:G.NH2/1
DC8:H.N4/1 2.95 ASP154:G.OD1/1
DC8:H.N4/1 3.19 ASP154:G.OD2/1
DG10:H.N7/1 2.66 ARG157:G.NH1/1
DG10:H.O6/1 2.59 ARG157:G.NH2/1
DA14:H.OP1/1 3.15 ASP21:G.OD2/1
DA14:H.OP2/1 2.98 LYS43:G.N/1
DA14:H.N7/1 2.68 THR76:G.OG1/1
DA14:H.N6/1 3.02 THR76:G.OG1/1
DG15:H.N7/1 2.74 ARG77:G.NE/1
DG15:H.O6/1 3.26 ARG77:G.NE/1
DG15:H.O6/1 3.32 ARG77:G.NH2/1
DT16:H.OP2/1 2.35 TYR25:G.OH/1
DC18:H.N4/1 3.35 TYR29:G.OH/1
DG20:H.OP2/1 2.29 LYS30:G.NZ/1
DG20:H.N7/1 3.34 ARG33:G.NH2/1
DG21:H.N7/1 2.9 ARG33:G.NH1/1
DG21:H.O6/1 2.6 ARG33:G.NH1/1
DG4:I.OP1/1 2.49 LYS85:G.NZ/1
DG4:I.OP2/1 2.78 SER34:G.OG/1
DG4:I.OP2/1 2.81 TYR36:G.OH/1
DG4:I.N7/1 3.18 SER34:G.N/1
DC5:I.OP2/1 2.8 LYS85:G.N/1
DC5:I.N4/1 3.11 SER34:G.O/1
DC6:I.OP1/1 3.05 LYS68:G.N/1
DC6:I.N4/1 3.15 GLU35:G.OE1/1
DG7:I.OP1/1 3.15 LYS68:G.NZ/1
DG8:I.N7/1 3.21 ARG81:G.NH1/1
DG8:I.N7/1 3.28 ARG81:G.NH2/1
DG8:I.O6/1 2.89 ARG37:G.NH2/1
DA9:I.N6/1 3.24 ARG81:G.NH2/1
DA14:I.OP2/1 3.27 LYS130:G.NZ/1
DC15:I.OP1/1 2.6 GLU117:G.OE2/1
DC15:I.OP1/1 3.32 ASN129:G.ND2/1
DC15:I.OP2/1 2.66 LYS130:G.N/1
DC15:I.N4/1 2.53 ASP155:G.OD2/1
DC15:I.N4/1 3 ARG157:G.NH2/1
DC17:O.OP2/1 2.71 LYS120:G.N/1
DG18:O.N7/1 3.11 ARG126:G.NH2/1
DG18:O.O6/1 3.02 ARG126:G.NH1/1
DG19:O.O6/1 2.82 ARG124:G.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT17:H.O4/1 2.94 2007:G/1 3.08 ARG37:G.NH1/1
DT17:H.O4/1 2.94 2007:G/1 2.63 GLU79:G.OE2/1
DC5:I.OP2/1 2.94 2006:G/1 2.82 TYR36:G.N/1
DC5:I.OP2/1 2.94 2006:G/1 2.99 SER83:G.OG/1
DC6:I.OP1/1 2.71 2013:G/1 2.6 LYS68:G.O/1
DC6:I.OP1/1 2.71 2013:G/1 3.05 GLN70:G.NE2/1
DC6:I.OP1/1 2.71 2013:G/1 2.97 SER83:G.N/1
DG7:I.N7/1 2.67 2005:G/1 2.66 GLU35:G.OE2/1
DG7:I.N7/1 2.67 2005:G/1 3.31 ARG37:G.NH2/1
DG7:I.N7/1 2.67 2005:G/1 3.32 GLN70:G.NE2/1
DG7:I.N7/1 2.67 2005:G/1 2.89 ARG81:G.NH1/1
DC15:I.OP1/1 3.04 2001:G/1 3.25 ASN129:G.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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