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Nucleic atom dist Protein atom
DT5:L.OP1/1 2.62 SER166:K.OG/1
DT5:L.OP2/1 2.68 LEU167:K.N/1
DG6:L.OP2/1 2.9 THR150:K.OG1/1
DG6:L.N7/1 3.06 ARG124:K.NH2/1
DG6:L.O6/1 2.87 ARG124:K.NH2/1
DC7:L.N4/1 3.49 ARG124:K.NH2/1
DC8:L.N4/1 3.06 ASP154:K.OD1/1
DC8:L.N4/1 3.19 ASP154:K.OD2/1
DG10:L.N7/1 2.92 ARG157:K.NH1/1
DG10:L.O6/1 2.73 ARG157:K.NH2/1
DA13:L.OP1/1 3.15 LYS43:K.NZ/1
DA14:L.OP1/1 3.15 LYS43:K.N/1
DA14:L.OP2/1 3 ASP21:K.OD2/1
DA14:L.N7/1 2.74 THR76:K.OG1/1
DA14:L.N6/1 3.09 THR76:K.OG1/1
DG15:M.N7/1 2.77 ARG77:K.NE/1
DG15:M.O6/1 3.28 ARG77:K.NE/1
DT16:M.OP2/1 2.5 TYR25:K.OH/1
DC18:M.N4/1 3.3 TYR29:K.OH/1
DC18:M.N4/1 3.28 ARG37:K.NH1/1
DG20:M.OP2/1 2.59 LYS30:K.NZ/1
DG20:M.N7/1 3.41 ARG33:K.NH2/1
DG21:M.N7/1 3.2 ARG33:K.NH1/1
DG21:M.O6/1 2.37 ARG33:K.NH1/1
DG4:N.OP1/1 2.54 LYS85:K.NZ/1
DG4:N.OP2/1 2.74 SER34:K.OG/1
DG4:N.OP2/1 2.76 TYR36:K.OH/1
DG4:N.N7/1 3.17 SER34:K.N/1
DC5:N.OP2/1 2.82 LYS85:K.N/1
DC5:N.N4/1 3.13 SER34:K.O/1
DC6:N.OP1/1 2.89 LYS68:K.N/1
DC6:N.N4/1 3.1 GLU35:K.OE1/1
DG8:N.N7/1 3.06 ARG81:K.NH1/1
DG8:N.N7/1 3.15 ARG81:K.NH2/1
DG8:N.O6/1 2.93 ARG37:K.NH2/1
DC15:N.OP1/1 2.87 GLU117:K.OE2/1
DC15:N.OP1/1 3.27 ASN129:K.ND2/1
DC15:N.OP2/1 2.51 LYS130:K.N/1
DC15:N.N4/1 2.78 ASP155:K.OD2/1
DC15:N.N4/1 3.06 ARG157:K.NH2/1
DC17:O.OP1/1 2.63 LYS120:K.N/1
DG18:O.N7/1 3.17 ARG126:K.NH2/1
DG18:O.O6/1 2.93 ARG126:K.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC7:L.N4/1 3.18 2018:K/1 3.2 ARG126:K.NH1/1
DA14:L.OP2/1 2.85 2004:K/1 3.13 GLN42:K.OE1/1
DA14:L.OP2/1 2.85 2004:K/1 2.89 VAL115:K.O/1
DA14:L.OP2/1 2.85 2004:K/1 2.9 ALA116:K.O/1
DA14:L.O3'/1 2.92 2003:K/1 2.39 ASP21:K.OD1/1
DC5:N.OP1/1 2.38 2012:K/1 3.16 LYS86:K.N/1
DC5:N.OP2/1 2.76 2008:K/1 2.78 TYR36:K.N/1
DC6:N.OP1/1 2.71 2011:K/1 2.12 LYS68:K.O/1
DC6:N.OP1/1 2.71 2011:K/1 3.1 SER83:K.N/1
DG7:N.N7/1 3.08 2007:K/1 2.51 GLN70:K.NE2/1
DG7:N.N7/1 3.08 2007:K/1 3.05 ARG81:K.NH1/1
DC15:N.OP1/1 3.1 2002:K/1 3.16 ASN129:K.ND2/1
DC15:N.O3'/1 2.81 2003:K/1 2.39 ASP21:K.OD1/1
DC15:N.O3'/1 2.81 2003:K/1 2.24 GLU117:K.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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