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Nucleic atom dist Protein atom
DT5:G.OP1/1 2.4 SER166:F.OG/1
DT5:G.OP2/1 2.66 LEU167:F.N/1
DG6:G.OP2/1 2.84 THR150:F.OG1/1
DG6:G.N7/1 3.03 ARG124:F.NH2/1
DG6:G.O6/1 3.14 ARG124:F.NH2/1
DC8:G.N4/1 3 ASP154:F.OD1/1
DC8:G.N4/1 3.14 ASP154:F.OD2/1
DG10:G.N7/1 2.93 ARG157:F.NH1/1
DG10:G.O6/1 2.59 ARG157:F.NH2/1
DA13:G.OP2/1 2.61 LYS43:F.NZ/1
DA14:G.OP1/1 3.07 ASP21:F.OD2/1
DA14:G.OP1/1 3.18 GLN42:F.OE1/1
DA14:G.OP2/1 2.87 LYS43:F.N/1
DA14:G.O3'/1 3.1 ASP21:F.OD1/1
DA14:G.N7/1 2.43 THR76:F.OG1/1
DA14:G.N6/1 3.11 THR76:F.OG1/1
DG15:H.N7/1 3.16 ARG77:F.NE/1
DG15:H.O6/1 3.1 ARG77:F.NE/1
DT16:H.OP2/1 2.5 TYR25:F.OH/1
DC18:H.N4/1 3.26 TYR29:F.OH/1
DG20:H.OP2/1 2.37 LYS30:F.NZ/1
DG21:H.N7/1 3.22 ARG33:F.NH1/1
DG21:H.O6/1 2.13 ARG33:F.NH1/1
DG4:I.OP1/1 2.75 LYS85:F.NZ/1
DG4:I.OP2/1 2.91 SER34:F.OG/1
DG4:I.OP2/1 2.89 TYR36:F.OH/1
DG4:I.N7/1 3.12 SER34:F.N/1
DC5:I.OP2/1 2.85 LYS85:F.N/1
DC5:I.N4/1 3 SER34:F.O/1
DC6:I.OP1/1 2.97 LYS68:F.N/1
DC6:I.N4/1 3.18 GLU35:F.OE1/1
DG8:I.N7/1 3.2 ARG81:F.NH1/1
DG8:I.N7/1 3.27 ARG81:F.NH2/1
DG8:I.O6/1 2.83 ARG37:F.NH2/1
DA9:I.N6/1 3.12 GLU79:F.OE1/1
DA9:I.N6/1 3.29 ARG81:F.NH2/1
DA14:I.OP2/1 3.49 LYS130:F.NZ/1
DC15:I.OP1/1 2.6 GLU117:F.OE2/1
DC15:I.OP2/1 2.72 LYS130:F.N/1
DC15:I.N4/1 2.69 ASP155:F.OD2/1
DC15:I.N4/1 3.16 ARG157:F.NH2/1
DC16:J.OP2/1 2.89 ALA116:F.O/1
DC17:J.OP2/1 2.72 LYS120:F.N/1
DG18:J.N7/1 3.11 ARG126:F.NH2/1
DG18:J.O6/1 2.83 ARG126:F.NH1/1
DG19:J.O6/1 2.91 ARG124:F.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA14:G.OP1/1 2.93 2003:F/1 2.52 GLN42:F.OE1/1
DA14:G.OP1/1 2.93 2003:F/1 2.79 VAL115:F.O/1
DA14:G.OP1/1 2.93 2003:F/1 2.84 ALA116:F.O/1
DA14:G.OP1/1 2.93 2003:F/1 3.23 LYS120:F.NZ/1
DA14:G.O3'/1 2.6 2002:F/1 2.25 ASP21:F.OD1/1
DA14:G.O3'/1 2.6 2002:F/1 2.34 GLU117:F.OE1/1
DT17:H.O4/1 3.1 2009:F/1 2.6 ARG37:F.NH1/1
DC5:I.OP2/1 2.68 2008:F/1 3 TYR36:F.N/1
DC5:I.OP2/1 2.68 2008:F/1 3.09 SER83:F.OG/1
DG7:I.N7/1 2.79 2007:F/1 2.96 GLU35:F.OE2/1
DG7:I.N7/1 2.79 2007:F/1 2.65 GLN70:F.NE2/1
DG7:I.N7/1 2.79 2007:F/1 3.09 ARG81:F.NH1/1
DA9:I.N7/1 2.8 2014:F/1 2.7 ARG77:F.NH2/1
DA9:I.N7/1 2.8 2014:F/1 2.48 GLU79:F.OE1/1
DC15:I.OP1/1 2.83 2001:F/1 3.18 ASN129:F.ND2/1
DC15:I.O3'/1 2.95 2002:F/1 2.25 ASP21:F.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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