Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC15:G.O3'/1 3.2 ARG586:D.NH2/1
DT16:G.OP1/1 2.35 ASN1442:D.ND2/1
DA17:G.OP2/1 2.97 GLN1441:D.N/1
DA17:G.O3'/1 2.66 ARG1096:D.NH1/1
DC18:G.OP1/1 2.98 ARG615:D.NH2/1
DG19:G.O4'/1 3 THR1088:D.O/1
DC20:G.O3'/1 3.15 GLU1036:C.OE2/1
DG21:G.N3/1 2.82 GLN744:D.NE2/1
DA22:G.OP1/1 3.4 ARG1031:C.N/1
DA22:G.OP1/1 3.41 ARG622:D.NH2/1
DA22:G.O4'/1 2.77 GLN744:D.NE2/1
DA22:G.O3'/1 3.45 ARG628:D.NE/1
DG28:G.OP1/1 3 ARG388:C.NH2/1
DG28:G.OP1/1 3.22 ARG534:D.NH2/1
DG28:G.OP2/1 2.95 ARG534:D.NH2/1
C2:H.OP1/1 2.12 LYS54:D.NZ/1
C2:H.O3'/1 2.76 GLU764:C.OE2/1
A3:H.OP1/1 3.29 GLU764:C.OE1/1
A3:H.O2'/1 3.4 ARG713:C.NH2/1
G4:H.OP1/1 2.52 GLN529:D.OE1/1
G8:H.OP1/1 2.6 GLN611:D.NE2/1
G10:H.O2'/1 2.66 GLN393:C.NE2/1
C11:H.O3'/1 2.97 ARG409:C.NH2/1
U12:H.OP1/1 3.33 ARG409:C.NH1/1
U12:H.O2'/1 2.41 GLN567:C.NE2/1
C13:H.O3'/1 3.09 LYS846:C.NZ/1
C13:H.O2'/1 3.01 GLY742:D.O/1
C13:H.O2/1 2.92 GLN744:D.OE1/1
G14:H.O3'/1 2.5 ASP739:D.OD1/1
G14:H.O3'/1 2.25 ASP741:D.OD2/1
G14:H.O3'/1 3.11 ASP743:D.OD2/1
G14:H.O2'/1 2.51 ARG704:D.NH1/1
C15:H.OP1/1 2.39 ASP739:D.OD2/1
C15:H.OP1/1 2.37 ASP741:D.OD1/1
C15:H.O4'/1 2.61 ARG704:D.NH2/1
C15:H.O2'/1 2.96 ASN737:D.O/1
A16:H.OP1/1 2.85 ASN737:D.OD1/1
A16:H.N6/1 2.73 GLU445:C.OE1/1
A16:H.N6/1 3.1 ASN556:C.OD1/1
DG4:I.O3'/1 2.44 ARG1266:D.NH2/1
DT6:I.OP1/1 3.06 LYS1426:D.NZ/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

text