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Nucleic atom dist Protein atom
G1:B.N2/1 2.9 ASN292:A.OD1/1
G2:B.OP1/1 3.08 LYS402:A.NZ/1
G2:B.O3'/1 3.35 GLN296:A.NE2/1
G2:B.O2'/1 3.43 GLN296:A.NE2/1
C3:B.OP1/1 2.91 LYS402:A.N/1
G4:B.OP1/1 3.02 ARG299:A.NH1/1
G4:B.OP1/1 2.74 ARG302:A.NH2/1
G4:B.OP2/1 3.18 ARG299:A.NH1/1
C15:B.O2'/1 2.37 ASN354:A.OD1/1
C15:B.N4/1 2.62 MET345:A.O/1
C22:B.OP1/1 2.63 LYS303:A.NZ/1
C23:B.OP2/1 3.16 THR399:A.OG1/1
C33:B.O2'/1 2.91 TYR165:A.OH/1
C33:B.O2/1 2.45 TYR165:A.OH/1
C34:B.O2'/1 2.47 ASP291:A.OD1/1
C37:B.O3'/1 3.1 THR130:A.OG1/1
C37:B.O2'/1 2.43 THR130:A.OG1/1
C37:B.O2/1 2.8 ALA126:A.O/1
G1:H.N7/1 2.82 ARG373:A.NH1/1
G1:H.N7/1 3.09 ARG373:A.NH2/1
G1:H.N2/1 3.5 ASN354:A.ND2/1
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Nucleic atom d_n2w water d_p2w Protein atom
C3:B.O2'/1 2.76 615:A/1 2.65 PRO295:A.O/1
C21:B.O3'/1 2.3 101:B/1 2.6 TYR392:A.OH/1
C22:B.OP1/1 2.8 101:B/1 2.6 TYR392:A.OH/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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