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Nucleic atom dist Protein atom
G1:D.N2/1 2.65 ASN292:C.OD1/1
G2:D.O3'/1 3.16 GLN296:C.NE2/1
G2:D.O2'/1 2.79 ASN292:C.O/1
G2:D.O2'/1 3.16 GLN296:C.NE2/1
C3:D.OP1/1 2.92 LYS402:C.N/1
G4:D.OP1/1 2.98 ARG299:C.NH1/1
C15:D.OP1/1 2.24 ARG361:C.NH1/1
C15:D.O3'/1 3.42 LYS357:C.NZ/1
C15:D.O2'/1 2.54 ASN354:C.OD1/1
C33:D.O2'/1 3.01 TYR165:C.OH/1
C33:D.O2/1 2.35 TYR165:C.OH/1
C34:D.O2'/1 2.3 ASP291:C.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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