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Nucleic atom dist Protein atom
G6:R.O3'/1 2.83 GLN776:B.NE2/1
G6:R.O2'/1 3.41 GLN776:B.NE2/1
A7:R.O3'/1 2.8 LYS979:B.NZ/1
G8:R.OP1/1 2.71 LYS979:B.NZ/1
G8:R.O3'/1 3.14 ASP483:A.OD1/1
G8:R.O2'/1 2.8 ARG446:A.NH2/1
G8:R.O2'/1 2.68 ASP485:A.OD1/1
U9:R.OP1/1 2.99 ASP483:A.OD2/1
U9:R.O4'/1 3.16 ARG446:A.NH2/1
U9:R.O2'/1 3.05 ASN479:A.OD1/1
U9:R.O2'/1 3.23 ASN479:A.ND2/1
DT22:T.OP1/1 3.16 ARG1129:B.NE/1
DC23:T.OP2/1 2.72 ARG344:A.NH1/1
DC23:T.OP2/1 3.24 ARG1129:B.N/1
DG26:T.OP1/1 3.08 ARG857:B.NH2/1
DA27:T.OP1/1 2.42 THR791:B.OG1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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