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Nucleic atom dist Protein atom
DG1:D.OP1/1 2.91 TYR267:A.OH/1
DG1:D.OP1/1 2.86 TYR279:A.OH/1
DG1:D.OP2/1 2.46 ARG275:A.NH1/1
DC2:D.OP1/1 2.83 GLY306:A.N/1
DC2:D.OP1/1 2.93 MET309:A.N/1
DC3:D.OP1/1 2.76 GLY304:A.N/1
DT4:P.OP1/1 2.77 GLY345:A.N/1
DT4:P.OP1/1 2.97 THR348:A.N/1
DT4:P.OP1/1 2.72 THR348:A.OG1/1
DT4:P.OP2/1 3.08 LYS347:A.N/1
DA5:P.OP1/1 2.76 GLY343:A.N/1
DOC6:P.OP1/1 2.95 TRP342:A.NE1/1
DOC6:P.OP1/1 3.02 ARG488:A.NH2/1
DC4:T.OP1/1 2.38 LYS521:A.NZ/1
DA5:T.OP1/1 2.9 ARG514:A.NH2/1
DA5:T.OP2/1 2.91 ARG514:A.NE/1
DA5:T.N3/1 3.41 ARG517:A.NH1/1
DG6:T.OP2/1 2.87 LYS521:A.NZ/1
DG6:T.N2/1 3.19 GLU529:A.OE2/1
DA8:T.OP1/1 3.04 GLN471:A.NE2/1
DA8:T.OP1/1 3.12 HIS530:A.NE2/1
DA8:T.O4'/1 3.1 LYS472:A.NZ/1
DC9:T.OP1/1 2.7 GLN471:A.N/1
DC9:T.OP1/1 3.34 LYS472:A.N/1
DT10:T.OP1/1 3.01 SER463:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:D.OP2/1 2.12 104:D/1 2.57 ARG275:A.NH1/1
DG1:D.OP2/1 2.12 104:D/1 2.5 ARG308:A.NH1/1
DA5:P.N3/1 2.93 109:P/1 2.99 LYS472:A.NZ/1
DOC6:P.O4'/1 2.96 109:P/1 2.99 LYS472:A.NZ/1
DOC6:P.OP1/1 2.89 818:A/1 2.68 ASP427:A.OD2/1
DG6:T.OP1/1 2.83 110:T/1 2.94 ARG517:A.O/1
DG6:T.OP1/1 2.83 110:T/1 2.98 LEU527:A.N/1
DT7:T.OP1/1 3.09 817:A/1 2.67 SER526:A.OG/1
DT7:T.OP1/1 2.83 765:A/1 2.73 SER528:A.OG/1
DC9:T.OP1/1 2.79 116:T/1 2.87 GLN464:A.N/1
DC9:T.OP1/1 2.79 116:T/1 2.9 LYS472:A.O/1
DC9:T.OP2/1 2.41 114:T/1 2.63 GLN464:A.OE1/1
DC9:T.OP2/1 2.65 124:T/1 2.73 GLN469:A.O/1
DC9:T.OP2/1 2.65 124:T/1 2.71 GLN471:A.NE2/1
DC9:T.O2/1 2.83 109:T/1 2.92 GLN372:A.NE2/1
DT10:T.O4'/1 3.05 109:T/1 2.92 GLN372:A.NE2/1
DG11:T.OP1/1 2.8 112:T/1 3.06 THR371:A.N/1
DG11:T.OP1/1 2.95 119:T/1 3.12 GLN372:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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