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Nucleic atom dist Protein atom
DC1:R.O5'/1 2.82 ARG379:L.NH1/1
DT2:R.OP2/1 2.82 THR408:L.N/1
DT20:R.OP1/1 2.63 TYR34:J.OH/1
DT20:R.OP2/1 2.3 HIS278:L.NE2/1
DG21:R.OP1/1 2.77 ARG274:L.NH1/1
DG23:R.N7/1 2.7 ARG264:L.NH2/1
DT25:R.OP2/1 2.68 TYR253:L.OH/1
DA28:R.OP2/1 3.21 LYS249:L.N/1
DC29:R.OP1/1 2.87 LYS249:L.NZ/1
DC29:R.OP2/1 2.63 SER251:L.OG/1
DT30:R.O2/1 2.8 ALA205:L.O/1
DT30:R.O2/1 3.02 LEU209:L.N/1
DG20:S.OP2/1 2.49 THR397:L.OG1/1
DG20:S.OP2/1 3.2 LEU398:L.N/1
DT21:S.O4/1 2.51 ARG409:L.NH1/1
DC22:S.OP2/1 3.01 ARG413:L.NH2/1
DC22:S.N4/1 2.45 GLU410:L.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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