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Nucleic atom dist Protein atom
DC1:R.O5'/1 2.95 ARG379:L.NH1/1
DT20:R.OP1/1 2.84 TYR34:J.OH/1
DT20:R.OP2/1 2.59 TYR34:J.OH/1
DT20:R.OP2/1 3.48 HIS278:L.NE2/1
DG21:R.OP2/1 2.78 ARG274:L.NH1/1
DG23:R.N7/1 3.14 ARG264:L.NH2/1
DC24:R.OP2/1 2.75 ARG237:L.NH2/1
DC24:R.N4/1 2.63 GLN260:L.OE1/1
DT25:R.OP2/1 3.11 TYR253:L.OH/1
DA26:R.N7/1 2.98 ARG246:L.NH1/1
DA26:R.N6/1 2.61 GLU243:L.OE2/1
DA26:R.N6/1 3.14 ARG246:L.NH1/1
DA28:R.OP2/1 2.64 LYS249:L.N/1
DC29:R.OP2/1 2.65 LYS249:L.NZ/1
DC29:R.N4/1 2.88 THR255:L.OG1/1
DT30:R.O3'/1 3.07 ARG208:L.O/1
DT30:R.O2/1 2.98 ALA205:L.O/1
DT30:R.N3/1 3.16 ASN206:L.OD1/1
DT1:S.O4/1 2.74 LYS216:L.O/1
DA2:S.OP2/1 3.36 ASN263:L.ND2/1
DC4:S.N4/1 2.97 GLU281:L.OE2/1
DG21:S.OP2/1 2.73 THR397:L.OG1/1
DG21:S.OP2/1 3.38 LEU398:L.N/1
DG21:S.N7/1 2.94 ARG409:L.NH2/1
DG21:S.O6/1 2.61 ARG409:L.NH2/1
DC23:S.N4/1 2.53 GLU410:L.OE1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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