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Nucleic atom dist Protein atom
DG4:C.N2/1 2.76 LEU111:A.O/1
DG4:C.N2/1 3 GLY146:A.O/1
DG6:C.O6/1 3.18 GLY110:A.N/1
DG6:C.O6/1 3.17 GLY146:A.O/1
DG6:C.N2/1 2.77 LYS145:A.O/1
DC7:C.O2/1 3.07 ASN179:A.N/1
DC7:C.N3/1 3.06 ASN179:A.N/1
DG8:C.O3'/1 3.1 LYS136:A.NZ/1
DG8:C.N2/1 3.07 ASN179:A.O/1
DT9:C.OP1/1 2.92 LYS136:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC7:C.OP2/1 3.06 213:A/1 2.85 ASN179:A.ND2/1
DT10:C.O4/1 2.56 102:C/1 3.04 LYS136:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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