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Nucleic atom dist Protein atom
DA7:A.N3/1 2.75 SER34:C.OG/1
DT9:A.OP1/1 2.85 LYS42:C.NZ/1
DT9:A.O2/1 2.96 ASN8:C.ND2/1
DG10:A.OP1/1 2.77 TRP41:C.NE1/1
DG10:A.N2/1 3.18 ARG5:C.NH1/1
DT11:A.O2/1 2.82 ARG5:C.NH1/1
DT13:A.O3'/1 3.29 ARG73:C.NH1/1
DG14:A.OP1/1 3.31 ARG73:C.NH1/1
DA6:B.N3/1 2.63 TYR72:C.OH/1
DC7:B.OP1/1 3.47 ARG75:C.N/1
DC7:B.O4'/1 2.99 TYR72:C.OH/1
DC7:B.O2/1 2.9 ARG5:C.NH1/1
DA8:B.OP1/1 2.93 ARG2:C.NH2/1
DA8:B.OP2/1 3.02 ARG2:C.NH1/1
DA8:B.O5'/1 3.09 ARG5:C.N/1
DT10:B.OP1/1 3.2 LYS15:C.NZ/1
DG11:B.O4'/1 2.91 ASN30:C.ND2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA7:A.OP1/1 3.04 137:C/1 3.03 LYS35:C.NZ/1
DG10:A.N2/1 2.96 107:A/1 3.38 ASN8:C.ND2/1
DT11:A.OP1/1 3.19 169:C/1 2.92 ALA9:C.N/1
DT13:A.OP1/1 2.78 119:A/1 2.87 TYR72:C.N/1
DA8:B.OP1/1 2.66 173:C/1 2.57 TYR70:C.OH/1
DA8:B.N3/1 2.74 123:B/1 3.24 PRO6:C.O/1
DA8:B.N3/1 2.74 123:B/1 2.84 ASN8:C.N/1
DA9:B.OP1/1 3.13 171:C/1 2.76 ARG5:C.O/1
DA9:B.O4'/1 3.02 167:C/1 2.78 MET11:C.O/1
DA9:B.N3/1 2.87 176:C/1 2.74 ARG18:C.NE/1
DG11:B.N2/1 3.16 184:C/1 2.85 ASN30:C.N/1
DT13:B.OP1/1 2.76 106:C/1 2.6 HIS29:C.NE2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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