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Nucleic atom dist Protein atom
DC2:C.OP2/1 2.2 HIS258:A.NE2/1
DC2:C.OP2/1 2.38 HIS258:B.NE2/1
DC2:C.O2/1 2.8 ASN256:A.ND2/1
DC2:C.O2/1 2.99 ASN256:B.ND2/1
DT3:C.OP1/1 2.94 GLN266:A.N/1
DT3:C.OP1/1 3.43 LYS229:B.N/1
DT3:C.OP1/1 2.87 GLN266:B.N/1
DT3:C.OP2/1 2.85 THR230:B.N/1
DT3:C.OP2/1 2.64 THR230:B.OG1/1
DC4:C.OP2/1 2.59 LYS229:B.NZ/1
DC7:C.OP1/1 2.76 THR239:A.OG1/1
DT9:C.OP1/1 3.21 ARG293:B.NH1/1
DG1:D.N2/1 3 GLU234:A.OE1/1
5IU2:D.OP2/1 2.44 HIS258:B.NE2/1
5IU2:D.OP2/1 2.48 HIS258:A.NE2/1
DG3:D.OP1/1 3.34 LYS229:B.N/1
DG3:D.OP1/1 2.84 GLN266:B.N/1
DG3:D.OP1/1 3.29 GLN266:B.O/1
DG3:D.OP1/1 2.92 GLN266:A.N/1
DG3:D.OP2/1 2.68 THR230:A.N/1
DG3:D.OP2/1 2.73 THR230:A.OG1/1
DA4:D.OP2/1 2.73 LYS229:A.NZ/1
DG9:D.OP1/1 2.34 ARG294:A.NH1/1
DG9:D.OP2/1 2.23 ARG294:B.NH1/1
DA15:D.O3'/1 3.12 THR261:A.O/1
DA15:D.O3'/1 2.85 THR261:B.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT1:C.O5'/1 3.22 2010:B/1 2.87 THR228:B.OG1/1
DC4:C.OP1/1 2.87 2018:A/1 2.9 ARG264:A.O/1
DC4:C.OP1/1 3.03 2018:B/1 2.77 ARG264:B.O/1
DC4:C.OP1/1 3.03 2018:B/1 3.26 GLN266:B.NE2/1
DG1:D.O5'/1 2.78 2006:A/1 2.66 THR228:A.OG1/1
DG1:D.N2/1 3.27 2006:A/1 2.66 THR228:A.OG1/1
DA4:D.OP1/1 2.77 2018:B/1 2.77 ARG264:B.O/1
DA4:D.OP1/1 2.77 2018:B/1 3.26 GLN266:B.NE2/1
DA4:D.OP1/1 2.81 2018:A/1 2.9 ARG264:A.O/1
DG14:D.N2/1 3.13 2017:A/1 2.87 ALA263:A.N/1
DG14:D.N2/1 3.08 2017:B/1 2.87 ALA263:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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