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Nucleic atom dist Protein atom
DT501:C.O5'/1 2.89 ASP35:B.O/1
DC502:C.OP2/1 2.8 LEU37:B.N/1
DC502:C.N4/1 2.67 ASP35:B.OD2/1
DA503:C.OP2/1 3.06 TYR36:B.OH/1
DG504:C.OP2/1 3.01 GLN41:B.NE2/1
DG504:C.N7/1 2.91 ARG33:B.NH2/1
DG504:C.O6/1 3.07 ARG33:B.NH1/1
DG508:C.N7/1 2.96 ARG71:B.NH1/1
DG508:C.O6/1 2.58 ARG71:B.NH2/1
DT509:C.OP2/1 2.99 ASN74:B.ND2/1
DC514:C.OP1/1 3.08 ASP23:A.OD2/1
DC514:C.OP1/1 2.91 GLN50:A.OE1/1
DC514:C.OP1/1 3.02 GLN50:A.NE2/1
DC514:C.OP2/1 2.62 SER51:A.N/1
DC514:C.O3'/1 2.97 ASP23:A.OD1/1
DT601:D.O5'/1 2.79 ASP35:A.O/1
DC602:D.OP1/1 2.96 LEU37:A.N/1
DC602:D.N4/1 2.89 ASP35:A.OD2/1
DA603:D.OP2/1 3.08 TYR36:A.OH/1
DG604:D.OP2/1 2.98 GLN41:A.NE2/1
DG604:D.N7/1 3.02 ARG33:A.NH2/1
DG604:D.O6/1 3.13 ARG33:A.NH1/1
DG608:D.N7/1 2.93 ARG71:A.NH1/1
DG608:D.O6/1 2.65 ARG71:A.NH2/1
DT609:D.OP2/1 3.29 ASN74:A.ND2/1
DC614:D.OP1/1 2.93 ASP23:B.OD2/1
DC614:D.OP2/1 2.91 SER51:B.N/1
DG515:E.OP2/1 2.68 ALA22:A.O/1
DG515:E.O6/1 2.79 ARG73:A.NH2/1
DA516:E.OP1/1 2.74 ASP140:A.N/1
DA516:E.N6/1 3.28 ARG73:A.NH1/1
DA516:E.N6/1 2.82 GLU79:A.OE2/1
DC517:E.OP2/1 2.46 THR139:A.OG1/1
DC517:E.OP2/1 3.04 ARG144:A.NH2/1
DC517:E.O5'/1 2.81 ASN27:A.ND2/1
DG518:E.OP1/1 2.75 THR145:A.N/1
DG518:E.OP1/1 2.81 ILE146:A.N/1
DG518:E.N7/1 3.35 GLN29:A.OE1/1
DT519:E.O4/1 2.53 ARG43:A.NH1/1
DG615:F.O6/1 2.61 ARG73:B.NH2/1
DA616:F.OP1/1 2.99 ASP140:B.N/1
DA616:F.N6/1 3.51 ARG73:B.NH1/1
DA616:F.N6/1 2.95 GLU79:B.OE2/1
DC617:F.OP2/1 2.38 THR139:B.OG1/1
DC617:F.OP2/1 3 ARG144:B.NH2/1
DC617:F.O5'/1 3.04 ASN27:B.ND2/1
DG618:F.OP1/1 2.78 THR145:B.N/1
DG618:F.OP1/1 2.92 ILE146:B.N/1
DG618:F.N7/1 3.25 GLN29:B.OE1/1
DT619:F.O4/1 2.83 ARG43:B.NH1/1
DT619:F.O4/1 3.21 ARG43:B.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC502:C.OP2/1 2.68 2015:B/1 3.2 LEU37:B.N/1
DC502:C.OP2/1 2.68 2015:B/1 3.09 LEU38:B.N/1
DA503:C.OP2/1 2.55 2062:B/1 3.15 THR119:B.OG1/1
DA503:C.OP2/1 2.63 2063:B/1 2.82 THR119:B.OG1/1
DA503:C.N7/1 2.59 2014:B/1 2.89 ASP35:B.OD1/1
DA503:C.N6/1 2.83 2014:B/1 2.89 ASP35:B.OD1/1
DG504:C.OP1/1 2.89 2045:B/1 3.12 GLY85:B.N/1
DG504:C.OP2/1 2.81 2013:B/1 3.34 GLN41:B.NE2/1
DG504:C.OP2/1 2.81 2013:B/1 2.99 ARG43:B.NE/1
DG504:C.OP2/1 2.39 2022:B/1 3.37 VAL44:B.N/1
DA505:C.OP2/1 2.9 2037:B/1 2.87 THR69:B.OG1/1
DA506:C.OP2/1 2.88 2038:B/1 2.67 VAL70:B.O/1
DC507:C.OP2/1 3.14 2040:B/1 2.99 ARG71:B.NH1/1
DC507:C.OP2/1 2.44 2041:B/1 3.1 LYS72:B.N/1
DC507:C.OP2/1 3.14 2040:B/1 2.81 LYS72:B.O/1
DC507:C.O5'/1 2.9 2040:B/1 2.99 ARG71:B.NH1/1
DC507:C.O5'/1 2.9 2040:B/1 2.81 LYS72:B.O/1
DG508:C.OP2/1 2.84 2039:B/1 3.21 ASN74:B.N/1
DT509:C.OP2/1 2.88 2042:B/1 2.65 ASN74:B.OD1/1
DA513:C.OP2/1 2.84 2031:A/1 2.56 SER51:A.OG/1
DA513:C.O5'/1 3.11 2031:A/1 2.56 SER51:A.OG/1
DC514:C.OP1/1 2.85 2005:A/1 2.87 GLN50:A.NE2/1
DC514:C.OP1/1 2.85 2005:A/1 2.83 ALA22:B.O/1
DC514:C.N4/1 2.9 2044:A/1 3 ASP75:A.OD2/1
DC602:D.OP1/1 2.88 2020:A/1 2.96 LEU38:A.N/1
DC602:D.O5'/1 3.18 2062:A/1 2.9 LYS120:A.NZ/1
DA603:D.OP1/1 2.84 2057:A/1 2.88 LEU116:A.O/1
DA603:D.OP2/1 2.97 2059:A/1 2.37 THR119:A.OG1/1
DA603:D.OP2/1 2.71 2060:A/1 3 THR119:A.OG1/1
DA603:D.N7/1 2.88 2019:A/1 2.81 ASP35:A.OD1/1
DA603:D.N6/1 3.1 2019:A/1 2.81 ASP35:A.OD1/1
DG604:D.OP1/1 2.84 2047:A/1 2.95 GLY85:A.N/1
DG604:D.OP2/1 2.75 2018:A/1 2.6 ARG43:A.NE/1
DG604:D.OP2/1 2.96 2027:A/1 2.86 VAL44:A.N/1
DA605:D.OP2/1 3.02 2037:A/1 2.92 THR69:A.OG1/1
DA605:D.OP2/1 3.03 2046:A/1 2.91 VAL83:A.N/1
DA606:D.OP2/1 3.28 2039:A/1 2.42 VAL70:A.O/1
DC607:D.OP2/1 3.03 2042:A/1 2.65 LYS72:A.N/1
DG608:D.OP2/1 3.02 2040:A/1 3.11 ASN74:A.N/1
DT609:D.OP2/1 3.15 2043:A/1 2.95 ASN74:A.OD1/1
DA613:D.OP1/1 2.82 2074:A/1 2.79 LYS142:A.NZ/1
DA613:D.OP2/1 3.19 2027:B/1 2.86 SER51:B.OG/1
DC614:D.OP1/1 3.1 2004:A/1 2.55 GLN50:B.NE2/1
DC614:D.N4/1 3.13 2044:B/1 2.55 ASP75:B.OD2/1
DA516:E.OP2/1 2.86 2008:A/1 3.35 ILE26:A.N/1
DA516:E.OP2/1 2.86 2008:A/1 3.12 ILE26:A.O/1
DA516:E.OP2/1 2.86 2008:A/1 3.01 GLN105:A.NE2/1
DC517:E.OP1/1 3.01 2069:A/1 2.84 GLY136:A.O/1
DC517:E.OP1/1 2.84 2073:A/1 3.09 LYS142:A.N/1
DC517:E.OP1/1 2.84 2073:A/1 2.62 LYS143:A.N/1
DC517:E.OP1/1 3.01 2069:A/1 3.35 ARG144:A.NE/1
DG518:E.OP2/1 3.14 2012:A/1 3.04 ILE30:A.N/1
DG518:E.OP2/1 2.94 2013:A/1 2.88 ILE30:A.O/1
DG518:E.OP2/1 3.14 2012:A/1 3.16 ARG144:A.NH1/1
DG518:E.O6/1 3.13 2010:A/1 2.73 ARG43:A.NH1/1
DT520:E.O4/1 2.85 2026:A/1 2.81 ARG43:A.NH2/1
DG615:F.OP2/1 3.18 2005:A/1 2.87 GLN50:A.NE2/1
DG615:F.OP2/1 3.18 2005:A/1 2.83 ALA22:B.O/1
DG615:F.OP2/1 2.58 2053:B/1 2.97 LYS102:B.NZ/1
DA616:F.OP2/1 3.12 2005:B/1 2.86 ILE26:B.N/1
DA616:F.OP2/1 3.12 2005:B/1 2.71 ILE26:B.O/1
DC617:F.OP1/1 2.89 2071:B/1 2.68 GLY136:B.O/1
DC617:F.OP1/1 2.89 2071:B/1 3.12 ARG144:B.NE/1
DG618:F.OP2/1 3.16 2008:B/1 2.69 ILE30:B.N/1
DG618:F.OP2/1 3.21 2009:B/1 2.83 ILE30:B.O/1
DG618:F.N7/1 3.2 2006:B/1 3.06 GLN29:B.NE2/1
DG618:F.O6/1 2.88 2006:B/1 3.06 GLN29:B.NE2/1
DG618:F.O6/1 2.88 2006:B/1 2.69 ARG43:B.NH1/1
DT620:F.O4/1 2.59 2021:B/1 2.6 ARG43:B.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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