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Nucleic atom dist Protein atom
DA-55:I.OP1/1 3.17 SER56:D.N/1
DA-44:I.OP2/1 2.6 ARG32:C.NH1/1
DG-43:I.OP1/1 2.62 ARG17:C.N/1
DG-43:I.OP2/1 3.04 ARG17:C.NE/1
DT-42:I.OP1/1 3 LYS15:C.N/1
DT-42:I.OP1/1 3.37 ARG20:C.NH2/1
DG-34:I.OP1/1 3.11 THR88:D.N/1
DG-34:I.OP1/1 2.88 THR88:D.OG1/1
DG-34:I.OP2/1 3.22 SER87:D.N/1
DA-33:I.OP2/1 3.28 LYS77:B.NZ/1
DA-33:I.OP2/1 2.92 ARG86:D.NH2/1
DT-26:I.OP1/1 3.21 ARG31:H.NH2/1
DC-24:I.OP2/1 3.24 SER86:A.N/1
DA-23:I.OP1/1 2.89 ARG72:A.NH1/1
DA-23:I.OP1/1 2.95 PHE84:A.N/1
DA-23:I.OP2/1 2.94 ARG72:A.NH2/1
DC-14:I.O3'/1 3.31 ARG63:A.NH1/1
DA-13:I.OP1/1 3.03 ARG36:B.NH2/1
DA-13:I.OP2/1 3.22 ARG36:B.NH1/1
DC-5:I.OP1/1 3.43 ARG42:A.NH1/1
DG-3:I.OP1/1 2.76 VAL117:A.N/1
DG-3:I.OP1/1 2.96 THR118:A.N/1
DT7:I.OP2/1 3.17 GLY48:F.N/1
DG8:I.OP1/1 2.7 ILE46:F.N/1
DA9:I.OP1/1 2.91 GLY44:E.N/1
DA9:I.OP1/1 2.9 VAL46:E.N/1
DA9:I.OP1/1 3.1 ALA47:E.N/1
DA9:I.N3/1 2.84 ARG40:E.NH2/1
DA10:I.OP1/1 2.95 TYR41:E.N/1
DT17:I.OP2/1 2.32 ARG69:E.NH2/1
DT17:I.O3'/1 3.25 ARG63:E.NH2/1
DT18:I.OP1/1 2.82 LYS64:E.N/1
DT18:I.OP2/1 2.81 LEU65:E.N/1
DG27:I.OP1/1 2.89 LYS79:F.NZ/1
DC28:I.OP1/1 2.85 LYS79:F.N/1
DC28:I.OP1/1 2.7 THR80:F.OG1/1
DG30:I.OP1/1 3.46 SER32:D.N/1
DG30:I.OP1/1 2.38 SER32:D.OG/1
DA38:I.OP1/1 2.92 ALA45:G.N/1
DT39:I.OP1/1 2.94 VAL43:G.N/1
DG49:I.OP1/1 3.16 ARG29:G.NH2/1
DG49:I.OP1/1 3.24 SER36:H.N/1
DT50:I.OP1/1 3.33 LYS34:H.N/1
DA51:I.O5'/1 2.49 ARG31:H.NH1/1
DC59:I.OP1/1 3.34 THR76:G.N/1
DC59:I.OP1/1 3.11 ARG77:G.N/1
DC59:I.OP2/1 3.22 THR76:G.N/1
DG71:I.OP1/1 2.91 ARG42:A.N/1
DG71:I.OP1/1 2.64 THR45:A.OG1/1
DT73:I.OP1/1 2.89 LYS37:A.NZ/1
DA-55:J.OP1/1 2.91 SER56:H.N/1
DA-44:J.OP2/1 3.13 ARG32:G.NE/1
DG-43:J.OP1/1 2.85 ARG17:G.N/1
DG-43:J.OP2/1 2.92 ARG17:G.NE/1
DT-42:J.OP1/1 3.39 LYS15:G.N/1
DG-34:J.OP1/1 3.38 SER87:H.N/1
DG-34:J.OP1/1 3.05 THR88:H.N/1
DG-34:J.OP2/1 3.32 SER87:H.N/1
DA-33:J.OP2/1 2.35 ARG86:H.NH2/1
DC-27:J.OP1/1 3.17 ARG29:D.N/1
DC-24:J.OP2/1 3.31 SER86:E.N/1
DA-23:J.OP1/1 2.84 ARG72:E.NH1/1
DA-23:J.OP1/1 2.93 PHE84:E.N/1
DA-23:J.OP2/1 2.97 ARG72:E.NH2/1
DT-22:J.OP2/1 2.98 ARG19:F.NH1/1
DC-21:J.OP1/1 2.85 ARG17:F.NH2/1
DC-14:J.O3'/1 2.95 ARG63:E.NH1/1
DA-13:J.OP1/1 2.83 ARG36:F.NH2/1
DA-13:J.OP2/1 3.13 ARG36:F.NH1/1
DG-3:J.OP1/1 2.68 VAL117:E.N/1
DG-3:J.OP1/1 2.92 THR118:E.N/1
DG-3:J.OP1/1 3.08 THR118:E.OG1/1
DT7:J.OP2/1 3.34 GLY48:B.N/1
DG8:J.OP1/1 2.67 ILE46:B.N/1
DG8:J.O3'/1 3.18 GLY44:A.N/1
DA9:J.OP1/1 2.89 GLY44:A.N/1
DA9:J.OP1/1 2.94 VAL46:A.N/1
DA9:J.OP1/1 3.12 ALA47:A.N/1
DA9:J.N3/1 2.5 ARG40:A.NH2/1
DA10:J.OP1/1 2.87 TYR41:A.N/1
DT17:J.OP2/1 2.47 ARG69:A.NH2/1
DT17:J.O3'/1 3.04 ARG63:A.NH2/1
DT18:J.OP1/1 3.04 LYS64:A.N/1
DT18:J.OP2/1 2.93 LEU65:A.N/1
DC28:J.OP1/1 2.85 LYS79:B.N/1
DC28:J.OP1/1 2.63 THR80:B.OG1/1
DG30:J.OP1/1 2.24 SER32:H.OG/1
DA38:J.OP1/1 3.05 ALA45:C.N/1
DT39:J.OP1/1 3.11 VAL43:C.N/1
DG49:J.OP1/1 3 ARG29:C.NH2/1
DG49:J.OP1/1 3.01 SER36:D.N/1
DG49:J.OP1/1 3.25 SER36:D.O/1
DT50:J.OP2/1 3.07 LYS34:D.O/1
DA51:J.OP1/1 3.21 ARG31:D.N/1
DC59:J.OP1/1 3.23 THR76:C.N/1
DC59:J.OP1/1 2.94 ARG77:C.N/1
DC59:J.OP2/1 3.37 THR76:C.N/1
DG71:J.OP1/1 2.77 ARG42:E.N/1
DG71:J.OP1/1 2.52 THR45:E.OG1/1
DA72:J.OP2/1 2.54 ARG42:E.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT-68:I.OP1/1 2.71 321:E/1 2.71 HIS39:E.N/1
DA-55:I.OP1/1 3.07 209:D/1 2.87 SER56:D.OG/1
DA-55:I.OP1/1 3.07 209:D/1 2.74 LYS57:D.N/1
DC-24:I.OP2/1 2.88 208:A/1 2.67 SER86:A.OG/1
DC-24:I.OP2/1 2.88 208:A/1 2.83 SER87:A.N/1
DG8:I.OP1/1 2.23 201:I/1 3.24 ARG39:F.NH1/1
DG8:I.OP1/1 2.23 201:I/1 2.79 ARG39:F.NH2/1
DG8:I.OP1/1 2.23 201:I/1 2.95 LYS44:F.O/1
DG8:I.OP2/1 2.78 203:F/1 2.46 ILE46:F.O/1
DG8:I.OP2/1 2.78 203:F/1 2.61 TYR51:F.OH/1
DC-24:J.OP2/1 3.14 338:E/1 2.9 SER86:E.OG/1
DC-24:J.OP2/1 3.14 338:E/1 2.95 SER87:E.N/1
DC-24:J.OP2/1 3.14 338:E/1 2.83 SER87:E.OG/1
DA-23:J.OP2/1 2.57 303:E/1 2.36 PHE84:E.O/1
DT-12:J.OP2/1 2.65 213:J/1 2.9 LYS31:F.N/1
DC59:J.OP1/1 2.53 201:C/1 2.43 ARG77:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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