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Nucleic atom dist Protein atom
DA-55:I.OP1/1 3.14 SER56:D.N/1
DA-55:I.OP1/1 3.12 SER56:D.OG/1
DA-55:I.OP2/1 2.97 SER56:D.OG/1
DA-46:I.O3'/1 2.98 ARG33:D.NH2/1
DA-44:I.OP2/1 2.73 ARG32:C.NE/1
DG-43:I.OP1/1 2.73 ARG17:C.N/1
DG-43:I.OP2/1 3.09 ARG17:C.NE/1
DT-42:I.OP1/1 3.1 LYS15:C.N/1
DG-34:I.OP1/1 3.1 THR88:D.N/1
DG-34:I.OP1/1 2.98 THR88:D.OG1/1
DG-34:I.OP2/1 3.19 SER87:D.N/1
DC-24:I.OP2/1 3.13 SER86:A.N/1
DA-23:I.OP1/1 2.8 ARG72:A.NH1/1
DA-23:I.OP1/1 3.07 PHE84:A.N/1
DA-23:I.OP2/1 3.02 ARG72:A.NH2/1
DA-13:I.OP1/1 3.03 ARG36:B.NH2/1
DA-13:I.OP2/1 3 ARG36:B.NH1/1
DC-5:I.OP1/1 2.85 ARG42:A.NE/1
DC-5:I.OP2/1 3.03 ARG42:A.NH2/1
DG-3:I.OP1/1 2.88 VAL117:A.N/1
DG-3:I.OP1/1 2.94 THR118:A.N/1
DG-3:I.OP1/1 2.74 THR118:A.OG1/1
DT7:I.OP2/1 3 GLY48:F.N/1
DG8:I.OP1/1 2.71 ILE46:F.N/1
DG8:I.O3'/1 3.26 GLY44:E.N/1
DA9:I.OP1/1 2.77 GLY44:E.N/1
DA9:I.OP1/1 2.98 VAL46:E.N/1
DA9:I.OP1/1 3.11 ALA47:E.N/1
DA9:I.N3/1 2.79 ARG40:E.NH2/1
DA10:I.OP1/1 2.82 TYR41:E.N/1
DT17:I.OP2/1 2.9 ARG69:E.NH1/1
DT17:I.OP2/1 3.12 ARG69:E.NH2/1
DT17:I.O3'/1 3.08 ARG63:E.NH2/1
DT18:I.OP1/1 3.28 ARG63:E.NE/1
DT18:I.OP1/1 2.87 LYS64:E.N/1
DT18:I.OP2/1 2.85 LEU65:E.N/1
DC28:I.OP1/1 2.92 LYS79:F.N/1
DC28:I.OP1/1 2.7 THR80:F.OG1/1
DG30:I.OP1/1 3.38 SER32:D.N/1
DG30:I.OP1/1 2.35 SER32:D.OG/1
DG30:I.N2/1 3.29 ARG29:D.NH2/1
DA38:I.OP1/1 2.91 ALA45:G.N/1
DT39:I.OP1/1 3.08 VAL43:G.N/1
DG49:I.OP1/1 2.92 ARG29:G.NH2/1
DG49:I.OP1/1 3.24 SER36:H.N/1
DT50:I.OP1/1 3.12 LYS34:H.N/1
DT50:I.O3'/1 2.73 ARG31:H.NH1/1
DA51:I.OP1/1 2.71 ARG31:H.NH1/1
DC59:I.OP1/1 3.26 THR76:G.N/1
DC59:I.OP1/1 3.12 ARG77:G.N/1
DC59:I.OP2/1 3.28 THR76:G.N/1
DG71:I.OP1/1 2.87 ARG42:A.N/1
DG71:I.OP1/1 2.73 THR45:A.OG1/1
DT73:I.OP1/1 2.74 LYS37:A.NZ/1
DA-55:J.OP1/1 2.87 SER56:H.N/1
DA-44:J.OP1/1 3.41 ARG32:G.NH2/1
DA-44:J.OP2/1 2.72 ARG32:G.NE/1
DG-43:J.OP1/1 2.81 ARG17:G.N/1
DG-43:J.OP2/1 2.81 ARG17:G.NE/1
DT-42:J.OP1/1 3.3 LYS15:G.N/1
DG-34:J.OP1/1 3.13 THR88:H.N/1
DG-34:J.OP2/1 3.14 SER87:H.N/1
DT-29:J.O2/1 2.79 ARG29:D.NH1/1
DT-29:J.O2/1 3.11 ARG29:D.NH2/1
DC-27:J.OP1/1 3.28 ARG29:D.N/1
DC-24:J.OP2/1 3.18 SER86:E.N/1
DA-23:J.OP1/1 2.87 ARG72:E.NH1/1
DA-23:J.OP1/1 2.98 PHE84:E.N/1
DA-23:J.OP2/1 2.99 ARG72:E.NH2/1
DC-14:J.O3'/1 3.17 ARG63:E.NH1/1
DA-13:J.OP1/1 2.89 ARG36:F.NH2/1
DA-13:J.OP2/1 2.92 ARG36:F.NH1/1
DG-3:J.OP1/1 2.85 VAL117:E.N/1
DG-3:J.OP1/1 2.89 THR118:E.N/1
DG-3:J.OP1/1 2.74 THR118:E.OG1/1
DT7:J.OP2/1 3.11 GLY48:B.N/1
DG8:J.OP1/1 2.72 ILE46:B.N/1
DG8:J.O3'/1 3.17 GLY44:A.N/1
DA9:J.OP1/1 2.86 GLY44:A.N/1
DA9:J.OP1/1 2.93 VAL46:A.N/1
DA9:J.OP1/1 3 ALA47:A.N/1
DA9:J.N3/1 2.46 ARG40:A.NH2/1
DA10:J.OP1/1 2.82 TYR41:A.N/1
DT17:J.OP1/1 3.08 ARG69:A.NH2/1
DT17:J.OP2/1 2.94 ARG69:A.NH1/1
DT18:J.OP1/1 3.19 LYS64:A.N/1
DT18:J.OP2/1 2.91 LEU65:A.N/1
DC28:J.OP1/1 2.97 LYS79:B.N/1
DC28:J.OP1/1 2.48 THR80:B.OG1/1
DA38:J.OP1/1 3.12 ALA45:C.N/1
DT39:J.OP1/1 3.19 VAL43:C.N/1
DG49:J.OP1/1 3.06 ARG29:C.NH2/1
DG49:J.OP1/1 3.02 SER36:D.N/1
DG49:J.OP1/1 3.21 SER36:D.O/1
DT50:J.OP1/1 2.8 LYS34:D.N/1
DC59:J.OP1/1 3.26 THR76:C.N/1
DC59:J.OP1/1 2.9 ARG77:C.N/1
DC59:J.OP2/1 3.29 THR76:C.N/1
DG71:J.OP1/1 2.76 ARG42:E.N/1
DG71:J.OP1/1 2.54 THR45:E.OG1/1
DA72:J.OP2/1 2.55 ARG42:E.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA-55:I.OP1/1 2.98 212:D/1 2.9 SER56:D.OG/1
DA-55:I.OP1/1 2.98 212:D/1 2.71 LYS57:D.N/1
DT-54:I.OP1/1 2.46 204:I/1 2.79 ILE54:D.N/1
DT-54:I.OP1/1 2.46 204:I/1 3.17 ILE54:D.O/1
DG-43:I.OP1/1 2.94 222:I/1 3.24 SER18:C.N/1
DG-43:I.OP1/1 2.94 222:I/1 3.18 SER18:C.OG/1
DG-43:I.OP1/1 2.94 222:I/1 2.95 GLY28:C.N/1
DA-33:I.OP1/1 2.74 215:I/1 2.77 ARG86:D.NE/1
DC-24:I.OP2/1 3.03 221:A/1 2.79 SER86:A.OG/1
DC-24:I.OP2/1 3.03 221:A/1 2.98 SER87:A.N/1
DC-24:I.OP2/1 3.03 221:A/1 3.06 SER87:A.OG/1
DT-12:I.OP2/1 2.82 216:I/1 3.08 LYS31:B.N/1
DG8:I.OP2/1 2.8 207:F/1 2.64 ILE46:F.O/1
DG8:I.OP2/1 2.8 207:F/1 2.67 TYR51:F.OH/1
DA10:I.OP1/1 2.66 212:I/1 3.27 HIS39:E.ND1/1
DG49:I.OP2/1 2.96 205:H/1 2.58 SER36:H.O/1
DG49:I.OP2/1 2.96 205:H/1 3.19 SER36:H.OG/1
DG49:I.OP2/1 2.96 205:H/1 3.17 ILE39:H.N/1
DC59:I.OP1/1 2.86 218:G/1 2.82 ARG77:G.O/1
DC-24:J.OP2/1 3.04 344:E/1 2.96 SER86:E.OG/1
DC-24:J.OP2/1 3.04 344:E/1 3.01 SER87:E.N/1
DC-24:J.OP2/1 3.04 344:E/1 3 SER87:E.OG/1
DA-23:J.OP2/1 2.65 212:J/1 3.35 ARG72:E.NH2/1
DA-23:J.OP2/1 2.67 307:E/1 2.57 PHE84:E.O/1
DA-13:J.OP1/1 3.04 201:F/1 2.53 THR30:F.OG1/1
DT-12:J.OP2/1 2.71 214:J/1 2.92 LYS31:F.N/1
DT-4:J.OP1/1 2.57 208:J/1 2.71 PRO43:E.O/1
DG8:J.OP2/1 2.83 203:B/1 2.44 ILE46:B.O/1
DG8:J.OP2/1 2.83 203:B/1 2.85 TYR51:B.OH/1
DG49:J.OP2/1 2.79 217:J/1 2.79 SER36:D.O/1
DG49:J.OP2/1 2.79 217:J/1 3.02 ILE39:D.N/1
DC59:J.OP1/1 2.76 201:C/1 2.48 ARG77:C.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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