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Nucleic atom dist Protein atom
DG7:T.OP1/1 2.65 THR292:A.OG1/1
DC8:T.OP1/1 3.07 ASN294:A.ND2/1
DG9:T.OP1/1 2.61 TYR296:A.OH/1
DC10:T.OP1/1 2.97 THR233:A.N/1
DC10:T.OP1/1 2.97 LYS234:A.N/1
DA11:T.OP1/1 3.14 LYS230:A.N/1
DC8:P.OP1/1 3.19 GLY107:A.N/1
DC8:P.OP1/1 2.87 ALA110:A.N/1
DC8:P.OP2/1 2.86 SER109:A.N/1
DG9:P.OP1/1 2.71 GLY105:A.N/1
DC10:P.OP1/1 2.99 ARG254:A.NH2/1
DC10:P.O3'/1 2.97 ASP192:A.OD1/1
DC10:P.O3'/1 2.68 ASP256:A.OD2/1
DC10:P.O2/1 2.75 TYR271:A.OH/1
DG1:D.OP1/1 2.88 LYS68:A.NZ/1
DT2:D.OP1/1 2.75 GLY66:A.N/1
DT2:D.OP1/1 2.98 ILE69:A.N/1
DT2:D.OP2/1 3.2 LYS68:A.N/1
DC3:D.OP1/1 2.84 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:T.OP1/1 2.7 109:T/1 2.86 ARG283:A.O/1
DG7:T.OP1/1 2.7 109:T/1 2.96 ILE293:A.N/1
DG7:T.N2/1 3.21 544:A/1 3.2 ARG258:A.NH1/1
DG7:T.N2/1 3.21 544:A/1 2.67 GLU295:A.OE2/1
DG7:T.N3/1 2.73 111:T/1 2.73 ARG283:A.NH1/1
DG7:T.N3/1 2.73 111:T/1 2.77 GLU295:A.OE1/1
DC8:T.OP1/1 2.89 504:A/1 2.5 ARG299:A.NH2/1
DC8:T.O2/1 3.19 544:A/1 2.67 GLU295:A.OE2/1
DG9:T.N2/1 3.07 506:A/1 2.53 LYS234:A.NZ/1
DC10:T.OP2/1 2.68 106:T/1 3 GLU232:A.N/1
DC10:T.OP2/1 2.68 106:T/1 3 GLU232:A.N/1
DC10:T.OP2/1 2.75 114:T/1 2.76 THR233:A.OG1/1
DA11:T.OP1/1 2.79 600:A/1 2.79 LYS230:A.O/1
DA11:T.OP2/1 2.76 116:T/1 2.85 LYS230:A.O/1
DT12:T.OP1/1 2.76 115:T/1 2.9 HIS134:A.N/1
DT12:T.OP1/1 3.04 131:T/1 3.04 HIS135:A.N/1
DG9:P.OP2/1 2.46 501:P/1 3.09 THR101:A.O/1
DC10:P.OP1/1 2.72 508:A/1 2.67 ASP190:A.OD2/1
DC10:P.OP1/1 2.72 508:A/1 2.93 ASP256:A.OD2/1
DC10:P.O3'/1 3.05 508:A/1 2.67 ASP190:A.OD2/1
DG1:D.OP1/1 2.99 554:A/1 2.8 TYR39:A.OH/1
DG1:D.OP1/1 2.99 554:A/1 2.69 LYS72:A.NZ/1
DC3:D.OP1/1 2.66 501:A/1 2.39 LYS60:A.O/1
DC3:D.OP1/1 2.66 501:A/1 2.45 LEU62:A.O/1
DC3:D.OP1/1 2.66 501:A/1 2.39 VAL65:A.O/1
DC3:D.OP2/1 2.75 107:D/1 3.32 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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