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Nucleic atom dist Protein atom
DG7:E.OP1/1 2.67 ARG98:A.NE/1
DA8:E.OP1/1 3.3 LYS49:A.NZ/1
DA9:E.OP2/1 2.78 HIS85:A.NE2/1
DT10:E.OP1/1 2.94 HIS87:A.ND1/1
DT10:E.OP2/1 3.17 ARG128:C.NH2/1
DT10:E.O3'/1 2.81 GLU459:B.OE2/1
DT16:E.OP1/1 2.63 ASN499:D.ND2/1
DT16:E.OP2/1 3.2 ARG495:D.NH2/1
DG17:E.OP1/1 2.91 ASN487:D.N/1
DG17:E.O3'/1 3.21 HIS539:D.NE2/1
DC18:E.OP1/1 2.85 TYR28:C.OH/1
DC18:E.OP1/1 2.99 HIS539:D.NE2/1
DC18:E.OP2/1 2.94 ASN487:D.ND2/1
DC18:E.OP2/1 2.87 LYS490:D.NZ/1
DA19:E.OP1/1 3.01 GLY184:C.N/1
DA19:E.OP1/1 2.55 ARG659:D.NH1/1
DA19:E.OP2/1 2.96 LYS490:D.NZ/1
DA19:E.OP2/1 3.13 ARG659:D.NH1/1
DG7:F.OP1/1 2.41 ARG98:C.NH1/1
DC8:F.OP1/1 2.67 HIS52:C.NE2/1
DA9:F.OP1/1 3.09 HIS85:C.NE2/1
DA9:F.OP2/1 3.07 HIS85:C.NE2/1
DT10:F.OP1/1 3.2 ARG128:A.NH2/1
DT10:F.OP1/1 2.87 HIS87:C.ND1/1
DT10:F.O3'/1 2.74 GLU459:D.OE2/1
DT10:F.O2/1 3.18 LYS484:D.N/1
DT16:F.OP1/1 2.72 ASN499:B.ND2/1
DT16:F.OP2/1 3.28 ARG495:B.NH2/1
DT17:F.OP1/1 2.96 ASN487:B.N/1
DT17:F.O3'/1 3.08 HIS539:B.NE2/1
DC18:F.OP1/1 2.67 TYR28:A.OH/1
DC18:F.OP1/1 2.86 HIS539:B.NE2/1
DC18:F.OP2/1 2.83 ASN487:B.ND2/1
DC18:F.OP2/1 2.92 LYS490:B.NZ/1
DA19:F.OP1/1 3.17 GLY184:A.N/1
DA19:F.OP1/1 2.76 ARG659:B.NE/1
DA19:F.OP1/1 3.16 ARG659:B.NH2/1
DA19:F.OP2/1 3.07 LYS490:B.NZ/1
DA19:F.OP2/1 3.19 ARG659:B.NH2/1
DG21:F.OP1/1 3.13 ARG248:A.NH1/1
DG7:G.OP1/1 2.79 ARG98:A.NE/1
DG7:G.OP1/1 3.08 ARG98:A.NH2/1
DC8:G.OP1/1 2.46 HIS52:A.NE2/1
DA9:G.OP2/1 2.75 HIS85:A.NE2/1
DT10:G.OP1/1 2.83 HIS87:A.ND1/1
DT10:G.OP2/1 3.17 ARG128:C.NH2/1
DT10:G.O3'/1 2.69 GLU459:B.OE2/1
DT10:G.O2/1 3.03 LYS484:B.N/1
DT16:G.OP1/1 2.59 ASN499:D.ND2/1
DT16:G.OP2/1 3.18 ARG495:D.NH2/1
DT17:G.OP1/1 2.8 ASN487:D.N/1
DT17:G.O3'/1 3 HIS539:D.NE2/1
DC18:G.OP1/1 2.8 TYR28:C.OH/1
DC18:G.OP1/1 2.89 HIS539:D.NE2/1
DC18:G.OP2/1 2.88 ASN487:D.ND2/1
DC18:G.OP2/1 3.09 LYS490:D.NZ/1
DA19:G.OP1/1 3.08 GLY184:C.N/1
DA19:G.OP1/1 2.54 ARG659:D.NH1/1
DA19:G.OP2/1 2.96 LYS490:D.NZ/1
DG7:H.OP1/1 2.29 ARG98:C.NH1/1
DA8:H.OP1/1 3.38 LYS49:C.NZ/1
DA8:H.OP1/1 3.05 HIS52:C.NE2/1
DA8:H.OP2/1 3.19 SER95:C.OG/1
DA9:H.OP1/1 2.97 HIS85:C.NE2/1
DA9:H.OP2/1 3.1 HIS85:C.NE2/1
DT10:H.OP1/1 3.16 ARG128:A.NH2/1
DT10:H.OP1/1 2.87 HIS87:C.ND1/1
DT10:H.O3'/1 2.76 GLU459:D.OE2/1
DT10:H.O2/1 3.17 LYS484:D.N/1
DT16:H.OP1/1 2.63 ASN499:B.ND2/1
DG17:H.OP1/1 2.75 ASN487:B.N/1
DG17:H.O3'/1 3.14 HIS539:B.NE2/1
DC18:H.OP1/1 2.78 TYR28:A.OH/1
DC18:H.OP1/1 3.03 HIS539:B.NE2/1
DC18:H.OP2/1 2.78 ASN487:B.ND2/1
DC18:H.OP2/1 2.86 LYS490:B.NZ/1
DC18:H.O5'/1 3.17 LYS490:B.NZ/1
DA19:H.OP1/1 3.14 GLY184:A.N/1
DA19:H.OP1/1 2.7 ARG659:B.NE/1
DA19:H.OP1/1 3.16 ARG659:B.NH2/1
DA19:H.OP2/1 3.01 LYS490:B.NZ/1
DA19:H.OP2/1 3.13 ARG659:B.NH2/1
DG21:H.OP1/1 3.02 ARG248:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:E.N3/1 3.26 213:G/1 3.24 ILE181:A.N/1
DA9:E.OP1/1 2.64 207:G/1 3.2 ARG39:A.O/1
DA9:E.OP1/1 2.58 204:G/1 3.1 ARG39:A.NE/1
DA9:E.OP1/1 2.64 207:G/1 3.14 VAL51:A.N/1
DA9:E.OP2/1 2.59 202:E/1 2.79 SER91:A.OG/1
DT10:E.OP1/1 2.79 811:B/1 2.63 ASP534:B.OD2/1
DT10:E.OP2/1 2.53 208:G/1 2.67 GLY88:A.N/1
DT10:E.OP2/1 2.53 208:G/1 2.7 SER91:A.OG/1
DA12:E.OP1/1 2.23 201:E/1 2.83 ALA126:C.N/1
DG17:E.N2/1 3.29 604:C/1 2.83 TYR31:C.OH/1
DG17:E.N3/1 3.3 619:C/1 2.6 TYR31:C.OH/1
DC18:E.O4'/1 2.79 619:C/1 2.6 TYR31:C.OH/1
DC20:E.OP2/1 2.69 203:E/1 2.7 ASP657:D.OD1/1
DC20:E.OP2/1 2.69 203:E/1 3.06 ARG660:D.NH1/1
DG21:E.O3'/1 2.69 204:E/1 3.06 SER250:C.OG/1
DG7:F.N2/1 2.66 206:F/1 2.87 ILE181:C.O/1
DG7:F.N3/1 2.84 210:F/1 2.95 ILE181:C.N/1
DC8:F.OP1/1 2.59 203:F/1 2.77 HIS52:C.NE2/1
DC8:F.OP1/1 2.59 203:F/1 2.96 SER95:C.O/1
DC8:F.OP2/1 2.65 205:F/1 3.03 SER91:C.O/1
DC8:F.OP2/1 2.65 205:F/1 2.78 SER95:C.OG/1
DC8:F.O4'/1 3.01 621:C/1 2.61 LYS49:C.NZ/1
DA9:F.OP1/1 2.69 205:H/1 3.02 ARG39:C.O/1
DA9:F.OP1/1 2.71 207:F/1 3.37 ARG39:C.NE/1
DA9:F.OP1/1 2.69 205:H/1 3.08 VAL51:C.N/1
DT10:F.OP1/1 2.9 807:D/1 2.58 ASP534:D.OD2/1
DT10:F.OP2/1 2.52 204:H/1 2.7 GLY88:C.N/1
DT10:F.OP2/1 2.52 204:H/1 2.66 SER91:C.OG/1
DG12:F.OP1/1 2.19 201:F/1 2.91 ALA126:A.N/1
DT17:F.O2/1 2.99 605:A/1 2.3 TYR31:A.OH/1
DC18:F.O4'/1 3.12 605:A/1 2.3 TYR31:A.OH/1
DT20:F.OP1/1 2.61 806:B/1 3.08 GLY184:A.O/1
DT20:F.OP1/1 2.78 208:F/1 2.82 ARG248:A.NH2/1
DT20:F.OP1/1 2.61 806:B/1 2.47 ARG660:B.NH1/1
DT20:F.OP2/1 2.72 813:B/1 2.65 ASP657:B.OD1/1
DC23:F.OP1/1 2.91 211:F/1 3.2 THR335:A.O/1
DG7:G.N3/1 3.16 213:G/1 3.24 ILE181:A.N/1
DA9:G.OP1/1 2.51 207:G/1 3.2 ARG39:A.O/1
DA9:G.OP1/1 2.46 204:G/1 3.1 ARG39:A.NE/1
DA9:G.OP1/1 2.51 207:G/1 3.14 VAL51:A.N/1
DA9:G.OP2/1 2.76 202:E/1 2.79 SER91:A.OG/1
DT10:G.OP1/1 2.78 811:B/1 2.63 ASP534:B.OD2/1
DT10:G.OP2/1 2.52 208:G/1 2.67 GLY88:A.N/1
DT10:G.OP2/1 2.52 208:G/1 2.7 SER91:A.OG/1
DG12:G.OP1/1 2.36 201:E/1 2.83 ALA126:C.N/1
DT17:G.O2/1 2.7 619:C/1 2.6 TYR31:C.OH/1
DC18:G.O4'/1 2.83 619:C/1 2.6 TYR31:C.OH/1
DC18:G.O2/1 2.87 212:G/1 3.03 ILE181:C.O/1
DT20:G.OP2/1 2.7 203:E/1 2.7 ASP657:D.OD1/1
DT20:G.OP2/1 2.7 203:E/1 3.06 ARG660:D.NH1/1
DG7:H.N2/1 2.86 206:F/1 2.87 ILE181:C.O/1
DG7:H.N3/1 3.02 210:F/1 2.95 ILE181:C.N/1
DA8:H.OP2/1 2.9 203:F/1 2.77 HIS52:C.NE2/1
DA8:H.OP2/1 2.9 203:F/1 2.96 SER95:C.O/1
DA8:H.O4'/1 2.97 621:C/1 2.61 LYS49:C.NZ/1
DA9:H.OP1/1 2.57 205:H/1 3.02 ARG39:C.O/1
DA9:H.OP1/1 2.97 207:F/1 3.37 ARG39:C.NE/1
DA9:H.OP1/1 2.57 205:H/1 3.08 VAL51:C.N/1
DT10:H.OP1/1 2.98 807:D/1 2.58 ASP534:D.OD2/1
DT10:H.OP2/1 2.49 204:H/1 2.7 GLY88:C.N/1
DT10:H.OP2/1 2.49 204:H/1 2.66 SER91:C.OG/1
DA12:H.OP1/1 2.28 201:F/1 2.91 ALA126:A.N/1
DG17:H.N2/1 3.05 621:A/1 2.63 TYR31:A.OH/1
DG17:H.N2/1 2.76 614:A/1 2.48 ARG39:A.NH1/1
DG17:H.N3/1 3.3 605:A/1 2.3 TYR31:A.OH/1
DC18:H.O2/1 2.86 636:A/1 2.7 ILE181:A.O/1
DC20:H.OP1/1 2.54 806:B/1 3.08 GLY184:A.O/1
DC20:H.OP1/1 2.89 208:F/1 2.82 ARG248:A.NH2/1
DC20:H.OP1/1 2.54 806:B/1 2.47 ARG660:B.NH1/1
DC20:H.OP2/1 2.73 813:B/1 2.65 ASP657:B.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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