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Nucleic atom dist Protein atom
DG7:E.OP1/1 2.44 ARG98:A.NH1/1
DA8:E.OP1/1 3.01 HIS52:A.NE2/1
DA9:E.OP2/1 2.77 HIS85:A.NE2/1
DT10:E.OP1/1 2.67 HIS87:A.ND1/1
DT10:E.OP1/1 3.03 ARG128:C.NH2/1
DT10:E.O3'/1 2.91 GLU459:B.OE2/1
DT16:E.OP1/1 2.67 ASN499:D.ND2/1
DT16:E.OP2/1 3.45 ARG495:D.NH2/1
DG17:E.OP1/1 2.91 ASN487:D.N/1
DG17:E.O3'/1 3.4 HIS539:D.NE2/1
DC18:E.OP1/1 2.98 TYR28:C.OH/1
DC18:E.OP1/1 3.14 HIS539:D.NE2/1
DC18:E.OP2/1 2.64 ASN487:D.ND2/1
DC18:E.OP2/1 2.9 LYS490:D.NZ/1
DC18:E.O5'/1 3.07 LYS490:D.NZ/1
DA19:E.OP1/1 3.42 GLY184:C.N/1
DA19:E.OP1/1 2.28 ARG659:D.NH1/1
DA19:E.OP2/1 2.71 LYS490:D.NZ/1
DG7:F.OP1/1 2.12 ARG98:C.NH1/1
DC8:F.OP1/1 2.54 HIS52:C.NE2/1
DC8:F.OP2/1 2.86 SER95:C.OG/1
DA9:F.OP2/1 2.56 HIS85:C.NE2/1
DT10:F.OP1/1 2.95 ARG128:A.NH2/1
DT10:F.OP1/1 2.98 HIS87:C.ND1/1
DT10:F.OP2/1 3.29 ARG128:A.NH1/1
DT10:F.OP2/1 3.02 ARG128:A.NH2/1
DT10:F.O3'/1 2.69 GLU459:D.OE2/1
DT10:F.O2/1 3.25 LYS484:D.N/1
DT16:F.OP1/1 2.65 ASN499:B.ND2/1
DT17:F.OP1/1 2.82 ASN487:B.N/1
DT17:F.O3'/1 3.14 HIS539:B.NE2/1
DC18:F.OP1/1 2.83 TYR28:A.OH/1
DC18:F.OP1/1 2.89 HIS539:B.NE2/1
DC18:F.OP2/1 2.58 ASN487:B.ND2/1
DC18:F.OP2/1 3.07 LYS490:B.NZ/1
DC18:F.O5'/1 3.07 LYS490:B.NZ/1
DA19:F.OP1/1 3.48 GLY184:A.N/1
DA19:F.OP1/1 2.56 ARG659:B.NE/1
DA19:F.OP1/1 2.89 ARG659:B.NH2/1
DA19:F.OP2/1 2.76 LYS490:B.NZ/1
DA19:F.OP2/1 3.1 ARG659:B.NH2/1
DA3:G.OP1/1 3.21 ARG492:B.NH1/1
DA3:G.OP2/1 3.42 ARG492:B.NH2/1
DG7:G.OP1/1 2.51 ARG98:A.NH1/1
DG7:G.O3'/1 3.37 LYS49:A.NZ/1
DC8:G.OP1/1 2.66 HIS52:A.NE2/1
DA9:G.OP2/1 3.1 HIS85:A.NE2/1
DT10:G.OP1/1 3.1 HIS87:A.ND1/1
DT10:G.OP1/1 3.16 ARG128:C.NH2/1
DT10:G.OP2/1 3.38 ARG128:C.NH1/1
DT10:G.OP2/1 3.27 ARG128:C.NH2/1
DT10:G.O3'/1 2.72 GLU459:B.OE2/1
DT10:G.O2/1 2.89 LYS484:B.N/1
DT16:G.OP1/1 2.55 ASN499:D.ND2/1
DT16:G.OP2/1 3.17 ARG495:D.NH2/1
DT17:G.OP1/1 2.95 ASN487:D.N/1
DT17:G.O3'/1 2.9 HIS539:D.NE2/1
DC18:G.OP1/1 2.64 TYR28:C.OH/1
DC18:G.OP1/1 2.83 HIS539:D.NE2/1
DC18:G.OP2/1 3.02 ASN487:D.ND2/1
DC18:G.OP2/1 3.09 LYS490:D.NZ/1
DA19:G.OP1/1 3.09 GLY184:C.N/1
DA19:G.OP1/1 2.54 ARG659:D.NH1/1
DA19:G.OP2/1 3.03 LYS490:D.NZ/1
DG21:G.OP1/1 3.17 ARG248:C.NE/1
DG7:H.OP1/1 2.63 ARG98:C.NH1/1
DA8:H.OP1/1 3.41 LYS49:C.NZ/1
DA8:H.OP1/1 3.42 HIS52:C.NE2/1
DA9:H.OP1/1 3.22 HIS85:C.NE2/1
DT10:H.OP1/1 3.13 ARG128:A.NH2/1
DT10:H.OP1/1 2.92 HIS87:C.ND1/1
DT10:H.O3'/1 2.96 GLU459:D.OE2/1
DT10:H.O2/1 3.11 LYS484:D.N/1
DT16:H.OP1/1 2.74 ASN499:B.ND2/1
DT16:H.OP2/1 3.3 ARG495:B.NH2/1
DG17:H.OP1/1 2.88 ASN487:B.N/1
DG17:H.O3'/1 3.06 HIS539:B.NE2/1
DC18:H.OP1/1 2.64 TYR28:A.OH/1
DC18:H.OP1/1 3.05 HIS539:B.NE2/1
DC18:H.OP2/1 2.94 ASN487:B.ND2/1
DC18:H.OP2/1 2.8 LYS490:B.NZ/1
DA19:H.OP1/1 2.95 GLY184:A.N/1
DA19:H.OP1/1 2.76 ARG659:B.NE/1
DA19:H.OP2/1 3.12 LYS490:B.NZ/1
DA19:H.OP2/1 3.32 ARG659:B.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA9:E.OP1/1 3.02 206:G/1 2.82 GLY38:A.O/1
DA9:E.OP1/1 2.47 203:E/1 3.16 ARG39:A.O/1
DA9:E.OP1/1 3.02 206:G/1 3.14 ARG39:A.NE/1
DA9:E.OP1/1 2.47 203:E/1 2.99 VAL51:A.N/1
DA9:E.OP2/1 2.57 204:E/1 2.64 SER91:A.OG/1
DT10:E.OP1/1 2.88 810:B/1 2.62 ASP534:B.OD2/1
DT10:E.OP2/1 2.23 202:E/1 2.68 GLY88:A.N/1
DT10:E.OP2/1 2.23 202:E/1 2.71 SER91:A.OG/1
DG11:E.O6/1 2.76 203:H/1 2.78 SER90:A.OG/1
DA12:E.OP1/1 2.16 201:E/1 3.36 ALA126:C.N/1
DT10:F.OP1/1 2.64 805:D/1 2.5 ASP534:D.OD2/1
DT10:F.OP2/1 2.54 205:H/1 2.76 GLY88:C.N/1
DT10:F.OP2/1 2.54 205:H/1 2.66 SER91:C.OG/1
DA11:F.N6/1 2.87 203:G/1 2.74 SER90:C.OG/1
DG12:F.OP1/1 2.31 202:H/1 3.29 ALA126:A.N/1
DC18:F.OP2/1 2.91 816:B/1 2.95 TYR28:A.OH/1
DA9:G.OP1/1 2.71 206:G/1 2.82 GLY38:A.O/1
DA9:G.OP1/1 2.86 203:E/1 3.16 ARG39:A.O/1
DA9:G.OP1/1 2.71 206:G/1 3.14 ARG39:A.NE/1
DA9:G.OP1/1 2.86 203:E/1 2.99 VAL51:A.N/1
DA9:G.OP2/1 2.64 204:E/1 2.64 SER91:A.OG/1
DT10:G.OP1/1 2.64 810:B/1 2.62 ASP534:B.OD2/1
DT10:G.OP2/1 2.58 202:E/1 2.68 GLY88:A.N/1
DT10:G.OP2/1 2.58 202:E/1 2.71 SER91:A.OG/1
DA11:G.N6/1 2.95 203:H/1 2.78 SER90:A.OG/1
DG12:G.OP1/1 2.29 201:E/1 3.36 ALA126:C.N/1
DT10:H.OP2/1 2.39 205:H/1 2.76 GLY88:C.N/1
DT10:H.OP2/1 2.39 205:H/1 2.66 SER91:C.OG/1
DG11:H.O6/1 3.13 203:G/1 2.74 SER90:C.OG/1
DA12:H.OP1/1 2.19 202:H/1 3.29 ALA126:A.N/1
DT16:H.O5'/1 2.95 210:H/1 3.21 ARG495:B.NH2/1
DC18:H.OP2/1 2.86 816:B/1 2.95 TYR28:A.OH/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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