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Nucleic atom dist Protein atom
DA3:D.OP1/1 2.98 GLY259:B.N/1
DA3:D.OP1/1 2.97 THR262:B.N/1
DA3:D.OP1/1 2.91 THR262:B.OG1/1
DA4:D.OP1/1 2.84 GLY257:B.N/1
DA4:D.O3'/1 3.32 ARG432:B.NH2/1
DA5:D.OP1/1 3.04 ARG432:B.NH2/1
DC6:D.OP1/1 2.85 ASP343:B.OD1/1
DC6:D.OP1/1 3.05 ASP343:B.OD2/1
DC6:D.OP1/1 3.19 ASP345:B.OD1/1
DC6:D.OP1/1 3.17 ASP345:B.OD2/1
DA2:E.OP1/1 2.97 GLY218:B.N/1
DA2:E.OP1/1 2.9 VAL221:B.N/1
DA2:E.OP2/1 3.19 LYS220:B.N/1
DA3:E.OP1/1 2.93 CYS216:B.N/1
DG6:F.OP1/1 3.12 ARG458:B.NH2/1
DG6:F.OP2/1 3.09 ARG458:B.NE/1
DG6:F.O6/1 2.9 ARG454:B.NE/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA5:D.OP1/1 2.83 721:B/1 2.8 ARG432:B.NE/1
DC6:D.OP1/1 3.09 702:B/1 2.6 ASP343:B.OD1/1
DC6:D.O2/1 2.99 726:B/1 3 GLY449:B.O/1
DC6:D.O2/1 2.99 726:B/1 2.94 ASN474:B.OD1/1
DA3:E.OP1/1 2.64 101:E/1 2.88 ILE214:B.O/1
DA3:E.OP1/1 2.64 101:E/1 2.69 LEU217:B.O/1
DG7:F.OP1/1 2.9 718:B/1 2.95 ARG461:B.O/1
DG7:F.OP1/1 2.9 718:B/1 2.77 LEU472:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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