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Nucleic atom dist Protein atom
DG1:X.O6/1 2.9 ASN153:A.ND2/1
DG21:Y.OP1/1 2.75 ARG202:A.NH2/1
DG21:Y.OP2/1 2.9 THR155:A.N/1
DG21:Y.OP2/1 2.6 THR155:A.OG1/1
DA23:Y.OP2/1 2.45 SER152:B.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:X.N7/1 2.8 114:X/1 3.2 ASN153:A.ND2/1
DG22:Y.N3/1 2.75 203:Y/1 2.94 ASN153:B.N/1
DA23:Y.OP2/1 2.77 402:B/1 2.45 SER147:B.OG/1
DA23:Y.OP2/1 2.77 402:B/1 3.13 ARG154:B.NH2/1
DA23:Y.O4'/1 2.94 451:B/1 2.8 ASN227:B.ND2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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