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Nucleic atom dist Protein atom
DC8:P.O2/1 2.57 TYR128:A.OH/1
DC12:P.OP1/1 3.42 ARG177:A.NE/1
DC12:P.OP2/1 3.01 ARG177:A.NH1/1
DG13:P.OP1/1 2.89 TRP280:A.NE1/1
DG13:P.OP2/1 3.09 ASN222:A.ND2/1
DG13:P.OP2/1 2.86 ASN226:A.ND2/1
DA14:P.OP1/1 2.77 LYS276:A.NZ/1
DC5:V.OP2/1 2.75 LYS224:A.NZ/1
DG11:V.N2/1 3.39 ARG177:A.NH2/1
DG12:V.OP1/1 3.1 MET271:A.N/1
DG14:V.OP1/1 2.73 LYS78:A.NZ/1
DC15:V.OP1/1 3.22 ALA74:A.N/1
DA16:V.OP1/1 3.11 ARG73:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG9:P.OP2/1 2.89 227:P/1 3 ARG181:A.NH1/1
DC12:P.OP1/1 2.95 511:A/1 2.5 ASN229:A.OD1/1
DC12:P.OP1/1 2.95 511:A/1 2.95 ALA230:A.O/1
DG13:P.OP1/1 2.78 565:A/1 3.01 THR268:A.N/1
DG13:P.OP1/1 2.78 565:A/1 2.7 VAL278:A.O/1
DG13:P.OP2/1 2.9 228:P/1 3.22 ARG221:A.N/1
DG13:P.OP2/1 2.9 228:P/1 2.91 ASN222:A.N/1
DA14:P.OP2/1 2.76 219:P/1 3 ASN222:A.ND2/1
DC13:V.O2/1 2.79 519:A/1 2.56 ASP70:A.OD1/1
DG14:V.O4'/1 3.1 519:A/1 2.56 ASP70:A.OD1/1
DC15:V.OP1/1 2.46 103:V/1 2.95 ARG73:A.N/1
DC15:V.OP1/1 2.46 103:V/1 2.94 ARG73:A.NE/1
DC15:V.OP1/1 2.46 103:V/1 3.11 LYS98:A.O/1
DC15:V.OP2/1 2.76 115:V/1 3.08 LYS77:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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