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Nucleic atom dist Protein atom
DG12:G.OP1/1 2.83 ASN1442:D.N/1
DA13:G.OP1/1 3.05 ARG615:D.NH1/1
DG14:G.OP1/1 3.26 LYS610:D.NZ/1
DT15:G.OP2/1 3.13 LYS610:D.NZ/1
DC16:G.OP1/1 2.51 ARG1031:C.NE/1
DG17:G.OP1/1 3.38 ARG1031:C.N/1
DG17:G.OP1/1 2.35 ARG622:D.NH1/1
DG17:G.OP2/1 3.23 ARG622:D.NH2/1
DA4:H.OP2/1 3 LYS234:F.N/1
DA5:H.OP2/1 2.93 LYS234:F.NZ/1
DA5:H.OP2/1 2.65 SER236:F.OG/1
DT6:H.O2/1 2.59 ALA190:F.O/1
DT6:H.O2/1 2.68 LEU194:F.N/1
DT6:H.N3/1 3.21 ASN191:F.OD1/1
DG7:H.N7/1 2.95 ARG193:F.NH1/1
DG9:H.O6/1 2.49 ARG243:C.NH1/1
DG11:H.O6/1 2.56 ARG266:C.NH2/1
DT13:H.O4/1 2.85 GLY169:C.O/1
DG14:H.N2/1 2.41 ASP326:C.OD1/1
C3:I.OP1/1 3.02 ARG420:C.NH1/1
U4:I.OP2/1 3.1 ARG420:C.NH1/1
U4:I.OP2/1 3.3 ASN448:C.ND2/1
G6:I.OP1/1 2.59 GLN567:C.NE2/1
A7:I.OP1/1 3.2 LYS838:C.NZ/1
A7:I.OP1/1 2.74 LYS846:C.NZ/1
A7:I.O3'/1 2.79 ARG704:D.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
C5:I.OP1/1 2.84 1207:C/1 2.37 ARG409:C.NH1/1
A7:I.O3'/1 2.62 2105:D/1 3.12 ARG704:D.NH2/1
A7:I.O3'/1 2.62 2105:D/1 2.63 ASP739:D.OD1/1
A7:I.O3'/1 2.62 2105:D/1 2.28 ASP743:D.OD2/1
A7:I.O2'/1 2.33 101:I/1 2.89 ALA705:D.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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