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Nucleic atom dist Protein atom
DG2:B.OP2/1 2.83 LYS193:A.N/1
DG2:B.N7/1 2.73 SER191:A.OG/1
DT3:B.OP1/1 2.77 HIS281:A.NE2/1
DA4:B.OP2/1 3.19 PHE242:A.N/1
DA4:B.N7/1 3.06 GLN197:A.NE2/1
DA4:B.N6/1 3.05 GLN197:A.OE1/1
DC5:B.OP1/1 3.33 ASN241:A.ND2/1
DC5:B.OP2/1 2.76 THR240:A.OG1/1
DC7:B.N4/1 3.36 GLU227:A.OE1/1
DG10:B.N7/1 2.91 ARG231:A.NH1/1
DG10:B.O6/1 2.83 ARG231:A.NH2/1
DA14:B.OP2/1 2.89 ASP48:A.N/1
DT15:B.OP2/1 2.87 GLU20:A.O/1
DG17:B.OP2/1 2.85 ASN139:A.ND2/1
DG17:B.N7/1 3.32 ARG79:A.NH2/1
DG17:B.O6/1 2.9 ARG79:A.NH1/1
DG17:B.O6/1 3.2 ARG79:A.NH2/1
DA18:B.OP2/1 3.25 ARG26:A.NE/1
DG19:B.N7/1 3.13 ARG26:A.NH1/1
DG19:B.N7/1 3.01 ARG26:A.NH2/1
DG19:B.O6/1 3.23 ARG26:A.NH1/1
DG20:B.N7/1 3.12 ARG28:A.NH2/1
DG20:B.O6/1 2.87 ARG28:A.NH1/1
DT3:C.OP2/1 2.77 LYS34:A.N/1
DA4:C.OP2/1 2.7 HIS122:A.NE2/1
DA4:C.N7/1 2.82 TYR33:A.OH/1
DT5:C.OP1/1 2.54 SER82:A.OG/1
DT5:C.OP1/1 3.32 GLU84:A.N/1
DT5:C.OP2/1 3.1 SER83:A.N/1
DC7:C.OP2/1 2.98 LYS69:A.NZ/1
DC7:C.N4/1 3.36 GLU81:A.OE1/1
DC7:C.N4/1 3.27 GLU81:A.OE2/1
DC10:C.N4/1 2.95 SER71:A.OG/1
DT15:C.OP2/1 3.13 HIS207:A.ND1/1
DT15:C.OP2/1 2.72 TRP234:A.NE1/1
DC16:C.OP2/1 3.02 ASP179:A.OD1/1
DC16:C.N4/1 2.82 TYR236:A.OH/1
DA17:C.OP2/1 2.64 SER181:A.OG/1
DA17:C.N7/1 3.19 GLN203:A.NE2/1
DG18:C.N7/1 2.75 LYS183:A.NZ/1
DG21:C.N7/1 2.73 LYS187:A.NZ/1
DT22:C.O4/1 3.43 LYS187:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG2:B.OP2/1 2.85 572:A/1 2.91 VAL194:A.N/1
DG2:B.OP2/1 2.85 572:A/1 2.83 LEU282:A.O/1
DT3:B.OP1/1 2.69 208:B/1 3.06 LYS279:A.NZ/1
DT3:B.OP2/1 2.71 211:B/1 3.18 GLN197:A.NE2/1
DT3:B.OP2/1 2.92 557:A/1 2.78 SER198:A.N/1
DT3:B.OP2/1 2.71 211:B/1 2.89 SER198:A.O/1
DC5:B.OP2/1 2.67 207:B/1 2.89 THR240:A.N/1
DC5:B.OP2/1 2.67 207:B/1 3.09 ASN241:A.N/1
DC8:B.OP2/1 2.54 204:B/1 2.95 SER230:A.OG/1
DC8:B.O5'/1 3.06 204:B/1 2.95 SER230:A.OG/1
DC8:B.N4/1 2.83 550:A/1 2.74 GLU227:A.OE1/1
DA13:B.OP2/1 2.83 538:A/1 2.71 ASP48:A.OD1/1
DA13:B.OP2/1 2.83 538:A/1 3.07 SER74:A.OG/1
DA14:B.OP2/1 2.79 505:A/1 2.5 ASP51:A.OD2/1
DT15:B.OP1/1 2.47 203:B/1 2.9 ALA19:A.O/1
DT15:B.OP2/1 2.6 206:B/1 2.83 GLU20:A.O/1
DT15:B.OP2/1 2.6 206:B/1 2.84 THR46:A.N/1
DT15:B.OP2/1 2.6 206:B/1 2.76 THR46:A.O/1
DG16:B.OP2/1 2.73 501:A/1 2.4 SER22:A.OG/1
DG16:B.OP2/1 3.07 551:A/1 2.75 ASN139:A.OD1/1
DG16:B.N7/1 3.18 509:A/1 2.76 SER44:A.OG/1
DG16:B.N7/1 3.18 509:A/1 2.56 THR46:A.OG1/1
DG16:B.O6/1 2.7 524:A/1 2.81 THR46:A.OG1/1
DG16:B.O6/1 2.7 524:A/1 2.65 SER71:A.OG/1
DG16:B.O6/1 2.7 524:A/1 3.16 ARG79:A.NH2/1
DG17:B.OP1/1 2.7 209:B/1 2.84 LYS135:A.NZ/1
DG17:B.OP2/1 2.7 210:B/1 2.91 VAL25:A.N/1
DG17:B.OP2/1 2.7 210:B/1 3.15 VAL25:A.O/1
DG17:B.OP2/1 2.7 210:B/1 3.25 LYS135:A.NZ/1
DA18:B.OP2/1 2.71 213:B/1 2.98 VAL27:A.N/1
DT3:C.OP2/1 2.85 114:C/1 3.3 THR35:A.N/1
DC6:C.OP2/1 2.72 108:C/1 2.84 GLU81:A.N/1
DC6:C.OP2/1 2.72 108:C/1 3.23 SER82:A.N/1
DC6:C.OP2/1 2.72 108:C/1 3.18 GLN85:A.NE2/1
DC6:C.N4/1 3 515:A/1 2.59 GLU81:A.OE1/1
DT8:C.O4/1 2.66 107:C/1 3 ARG79:A.NH1/1
DT8:C.O4/1 2.66 107:C/1 3.02 GLU81:A.OE2/1
DC9:C.N4/1 2.88 554:A/1 2.96 LYS70:A.O/1
DC9:C.N4/1 2.88 554:A/1 2.77 SER77:A.OG/1
DT15:C.OP1/1 2.75 111:C/1 2.77 HIS207:A.N/1
DC16:C.OP2/1 2.37 101:C/1 2.78 THR205:A.O/1
DA17:C.N6/1 2.74 109:C/1 3.09 GLN203:A.OE1/1
DG19:C.N7/1 2.74 110:C/1 3.26 LYS183:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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