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Nucleic atom dist Protein atom
G101:W.N2/1 3.03 ASP39:V.OD2/1
A102:W.N6/1 2.88 LYS37:V.O/1
G103:W.O2'/1 2.96 PHE32:L.N/1
G103:W.O6/1 2.78 LYS56:L.NZ/1
G103:W.N2/1 3.14 THR30:L.O/1
G103:W.N2/1 2.74 GLU36:V.OE1/1
U104:W.O4/1 3.36 ARG58:L.NH1/1
G106:W.N2/1 3.02 ASP39:L.OD2/1
A107:W.N6/1 2.94 LYS37:L.O/1
G108:W.O2'/1 3 PHE32:M.N/1
G108:W.O6/1 2.93 LYS56:M.NZ/1
G108:W.N2/1 2.65 GLU36:L.OE1/1
G108:W.N2/1 3.25 THR30:M.O/1
U109:W.O4/1 3.09 ARG58:M.NH1/1
G111:W.N2/1 2.9 ASP39:M.OD1/1
A112:W.N6/1 2.97 LYS37:M.O/1
G113:W.O2'/1 2.8 PHE32:N.N/1
G113:W.O6/1 2.89 LYS56:N.NZ/1
G113:W.N2/1 2.75 GLU36:M.OE1/1
G113:W.N2/1 3.09 THR30:N.O/1
U114:W.O4/1 3.2 ARG58:N.NH1/1
G116:W.N2/1 3.23 ASP39:N.OD2/1
A117:W.N6/1 2.93 LYS37:N.O/1
G118:W.O2'/1 2.81 PHE32:O.N/1
G118:W.O6/1 2.74 LYS56:O.NZ/1
G118:W.N2/1 2.66 GLU36:N.OE1/1
G118:W.N2/1 3.21 THR30:O.O/1
U119:W.O4/1 3.07 ARG58:O.NH1/1
G121:W.N2/1 3.1 ASP39:O.OD2/1
A122:W.N6/1 2.82 LYS37:O.O/1
G123:W.O2'/1 2.81 PHE32:P.N/1
G123:W.O6/1 2.81 LYS56:P.NZ/1
G123:W.N2/1 2.64 GLU36:O.OE1/1
G123:W.N2/1 3.26 THR30:P.O/1
U124:W.O4/1 2.7 ARG58:P.NH1/1
G126:W.N2/1 2.92 ASP39:P.OD1/1
G126:W.N2/1 2.87 ASP39:P.OD2/1
A127:W.N6/1 2.89 LYS37:P.O/1
G128:W.O2'/1 2.86 PHE32:Q.N/1
G128:W.O6/1 2.92 LYS56:Q.NZ/1
G128:W.N2/1 2.71 GLU36:P.OE1/1
G128:W.N2/1 3.24 THR30:Q.O/1
U129:W.O2'/1 3.36 LYS37:Q.NZ/1
U129:W.N3/1 3.14 ARG58:Q.NH1/1
U129:W.O4/1 2.9 ARG58:Q.NH1/1
G131:W.OP1/1 2.96 LYS37:Q.NZ/1
G131:W.N2/1 3.13 ASP39:Q.OD1/1
G131:W.N2/1 3.02 ASP39:Q.OD2/1
A132:W.N6/1 2.84 LYS37:Q.O/1
G133:W.O2'/1 2.87 PHE32:R.N/1
G133:W.O6/1 2.66 LYS56:R.NZ/1
G133:W.N2/1 2.64 GLU36:Q.OE1/1
G133:W.N2/1 3.18 THR30:R.O/1
U134:W.O4/1 3.12 ARG58:R.NH2/1
G136:W.N2/1 3.07 ASP39:R.OD1/1
G136:W.N2/1 3.16 ASP39:R.OD2/1
A137:W.N6/1 2.83 LYS37:R.O/1
G138:W.O2'/1 2.79 PHE32:S.N/1
G138:W.O6/1 2.96 LYS56:S.NZ/1
G138:W.N2/1 2.5 GLU36:R.OE1/1
G138:W.N2/1 3.15 THR30:S.O/1
U139:W.O4/1 3.37 ARG58:S.NH1/1
G141:W.N2/1 3.04 ASP39:S.OD1/1
G141:W.N2/1 2.98 ASP39:S.OD2/1
A142:W.N6/1 2.85 LYS37:S.O/1
G143:W.O2'/1 2.81 PHE32:T.N/1
G143:W.O6/1 2.94 LYS56:T.NZ/1
G143:W.N2/1 2.52 GLU36:S.OE1/1
G143:W.N2/1 3.31 THR30:T.O/1
U144:W.O2/1 2.93 SER35:T.OG/1
G146:W.N2/1 3.08 ASP39:T.OD2/1
A147:W.N6/1 2.98 LYS37:T.O/1
G148:W.O2'/1 2.54 PHE32:U.N/1
G148:W.O6/1 2.88 LYS56:U.NZ/1
G148:W.N2/1 2.38 GLU36:T.OE1/1
G148:W.N2/1 3.37 THR30:U.O/1
U149:W.O4/1 3.23 ARG58:U.NH1/1
G151:W.N2/1 3.02 ASP39:U.OD2/1
A152:W.N6/1 2.99 LYS37:U.O/1
G153:W.O2'/1 2.91 PHE32:V.N/1
G153:W.O6/1 2.9 LYS56:V.NZ/1
G153:W.N2/1 2.71 GLU36:U.OE1/1
G153:W.N2/1 3.14 THR30:V.O/1
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Nucleic atom d_n2w water d_p2w Protein atom
U104:W.N3/1 3.28 206:L/1 2.87 ASN20:L.OD1/1
U104:W.N3/1 3.28 206:L/1 2.65 ARG58:L.NH1/1
A107:W.O2'/1 2.7 207:W/1 3.04 THR30:M.O/1
A112:W.O2'/1 2.66 203:W/1 3.03 THR30:N.O/1
G113:W.N3/1 3.11 203:W/1 3.03 THR30:N.O/1
U114:W.N3/1 2.71 208:W/1 3.01 ASN20:N.OD1/1
U114:W.N3/1 2.71 208:W/1 2.75 ARG58:N.NH1/1
A117:W.O2'/1 2.9 228:O/1 2.89 THR30:O.O/1
A117:W.N7/1 3.3 212:W/1 3.17 ARG58:O.NH2/1
G118:W.N7/1 2.93 212:W/1 3.17 ARG58:O.NH2/1
G118:W.O6/1 2.78 212:W/1 3.17 ARG58:O.NH2/1
G118:W.N3/1 3.01 228:O/1 2.89 THR30:O.O/1
U119:W.N3/1 2.71 206:O/1 2.55 ASN20:O.OD1/1
U119:W.N3/1 2.71 206:O/1 3.09 ARG58:O.NH1/1
A127:W.O2'/1 2.74 209:W/1 2.77 THR30:Q.O/1
G128:W.N3/1 3.18 209:W/1 2.77 THR30:Q.O/1
A132:W.O2'/1 2.77 211:W/1 3.02 THR30:R.O/1
A137:W.O2'/1 2.77 210:W/1 3.14 THR30:S.O/1
A142:W.O2'/1 2.99 212:T/1 2.69 THR30:T.O/1
G151:W.N2/1 2.84 213:W/1 2.96 ARG58:V.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2020

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