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Nucleic atom dist Protein atom
DT7:T.OP1/1 2.65 THR292:A.OG1/1
DT7:T.O2/1 3.34 ARG283:A.NH1/1
DC8:T.OP1/1 2.84 ASN294:A.ND2/1
DG9:T.OP1/1 2.4 TYR296:A.OH/1
DC10:T.OP1/1 2.94 THR233:A.N/1
DC10:T.OP1/1 2.84 LYS234:A.N/1
DA11:T.OP1/1 3.03 LYS230:A.N/1
DC8:P.OP1/1 3.16 GLY107:A.N/1
DC8:P.OP1/1 2.88 ALA110:A.N/1
DC8:P.OP2/1 2.83 SER109:A.N/1
DG9:P.OP1/1 2.8 GLY105:A.N/1
DA10:P.OP1/1 2.75 ARG254:A.NH2/1
DA10:P.O3'/1 2.83 ASP256:A.OD2/1
DA10:P.N3/1 2.85 TYR271:A.OH/1
DG1:D.OP1/1 3.01 LYS68:A.NZ/1
DG1:D.OP2/1 2.72 LYS68:A.NZ/1
DT2:D.OP1/1 2.86 GLY66:A.N/1
DT2:D.OP1/1 2.97 ILE69:A.N/1
DT2:D.OP2/1 3.14 LYS68:A.N/1
DC3:D.OP1/1 2.85 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT7:T.OP1/1 2.62 103:T/1 2.8 ARG283:A.O/1
DT7:T.OP1/1 2.62 103:T/1 3.15 ILE293:A.N/1
DC8:T.OP1/1 3.21 630:A/1 3.06 ARG299:A.NH2/1
DC10:T.OP2/1 2.71 105:T/1 3.03 GLU232:A.N/1
DA11:T.OP1/1 2.91 604:A/1 2.91 LYS230:A.O/1
DA11:T.OP2/1 2.41 101:T/1 2.88 LYS230:A.O/1
DA11:T.O3'/1 3.08 110:T/1 3.16 HIS135:A.N/1
DT12:T.OP1/1 3.01 110:T/1 3.16 HIS135:A.N/1
DG7:P.OP1/1 2.99 108:P/1 3.3 GLN31:A.NE2/1
DA10:P.OP1/1 2.69 104:P/1 2.85 ASP190:A.OD2/1
DG1:D.OP1/1 2.83 103:D/1 2.98 LYS72:A.NZ/1
DG1:D.OP1/1 2.83 103:D/1 3.19 LYS84:A.NZ/1
DC3:D.OP2/1 2.77 102:D/1 2.98 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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