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Nucleic atom dist Protein atom
DG2:C.OP2/1 2.8 LYS100:A.NZ/1
DT4:C.OP2/1 3 THR218:A.OG1/1
DT4:C.OP2/1 2.46 THR218:B.OG1/1
DA5:C.OP1/1 2.98 ILE163:B.N/1
DA5:C.OP1/1 2.87 ILE163:A.N/1
DA5:C.OP1/1 2.64 TYR196:A.OH/1
DA5:C.OP1/1 2.97 ARG191:B.NH2/1
DA5:C.OP2/1 3.17 ARG191:B.NH1/1
DA5:C.OP2/1 3.09 ARG191:B.NH2/1
DC6:C.OP1/1 2.79 GLU179:B.OE1/1
DC6:C.OP1/1 2.76 LYS181:A.NZ/1
DC6:C.OP1/1 3.11 GLN192:A.OE1/1
DC6:C.OP2/1 3.1 GLN192:A.NE2/1
DA7:C.OP1/1 3.01 GLU132:B.N/1
DA7:C.OP1/1 3.03 GLU132:A.N/1
DT8:C.O4'/1 3.1 TYR41:A.OH/1
DT8:C.O2/1 2.82 ARG44:B.NH2/1
DT8:C.O4/1 2.73 ASN76:A.ND2/1
DT8:C.O4/1 2.6 ASN76:B.ND2/1
DT8:C.O4/1 3.11 TRP77:B.N/1
DG9:C.OP1/1 3.18 ARG183:A.NH1/1
DG9:C.OP2/1 2.74 ARG182:B.NH1/1
DG9:C.OP2/1 3.08 ARG182:A.NH1/1
DT10:C.OP1/1 2.87 ARG44:A.NH2/1
DT10:C.OP1/1 3.09 ARG44:B.NH2/1
DT10:C.OP1/1 2.51 TRP77:B.NE1/1
DT10:C.OP2/1 2.97 ARG44:A.NH1/1
DT10:C.OP2/1 2.94 ARG44:B.NH1/1
DC11:C.OP1/1 2.38 ARG72:B.N/1
DC11:C.OP1/1 2.87 ARG72:A.N/1
DG12:C.OP1/1 2.89 LYS71:A.NZ/1
DG12:C.OP2/1 2.82 LYS71:A.NZ/1
DG2:D.OP2/1 2.91 LYS100:A.NZ/1
DA3:D.OP1/1 3.12 SER219:A.N/1
DC4:D.OP2/1 2.9 THR218:B.OG1/1
DG5:D.OP1/1 3.02 ILE163:A.N/1
DG5:D.OP1/1 2.98 ARG191:A.NH2/1
DG5:D.OP1/1 2.94 ILE163:B.N/1
DG5:D.OP1/1 2.73 TYR196:B.OH/1
DG5:D.OP2/1 3 ARG191:A.NH2/1
DA6:D.OP1/1 2.8 GLU179:A.OE1/1
DA6:D.OP1/1 2.92 GLU179:B.OE1/1
DA6:D.OP1/1 2.73 LYS181:B.NZ/1
DA6:D.OP2/1 3.28 GLN192:B.NE2/1
DC7:D.OP1/1 2.7 GLU132:A.N/1
DC7:D.OP1/1 2.87 GLU132:B.N/1
DT8:D.O2/1 2.7 ARG44:A.NH2/1
DT8:D.O4/1 2.89 ASN76:B.ND2/1
DT8:D.O4/1 2.76 ASN76:A.ND2/1
DT8:D.O4/1 3.03 TRP77:A.N/1
DT9:D.OP1/1 3.31 ARG44:A.NH1/1
DT9:D.OP1/1 3.25 ARG183:B.NH1/1
DT9:D.OP2/1 2.85 ARG182:B.NH1/1
DG10:D.OP1/1 3.09 ARG44:B.NH2/1
DG10:D.OP1/1 2.94 ARG44:A.NH2/1
DG10:D.OP1/1 2.81 TRP77:A.NE1/1
DG10:D.OP2/1 3.03 ARG44:B.NH1/1
DG10:D.OP2/1 3.04 ARG44:A.NH1/1
DT11:D.OP1/1 2.75 ARG72:A.N/1
DT11:D.OP1/1 2.64 ARG72:B.N/1
DG15:D.OP2/1 3.26 ALA158:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC6:C.O3'/1 3.05 203:D/1 3.3 ALA133:B.N/1
DA7:C.OP1/1 2.8 203:D/1 3.3 ALA133:B.N/1
DA7:C.OP2/1 2.68 202:C/1 2.68 ARG182:A.N/1
DC7:D.OP1/1 2.8 203:D/1 3.3 ALA133:B.N/1
DC7:D.OP2/1 2.83 202:C/1 2.68 ARG182:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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