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Nucleic atom dist Protein atom
DC3:C.OP1/1 3.11 SER219:B.N/1
DC3:C.OP2/1 2.82 ARG184:A.NH1/1
DT4:C.OP1/1 3.42 ARG223:A.NH2/1
DT4:C.OP2/1 2.83 THR218:A.OG1/1
DT4:C.OP2/1 3.36 GLY220:A.N/1
DT4:C.OP2/1 2.58 THR218:B.OG1/1
DA5:C.OP1/1 3.18 ILE163:B.N/1
DA5:C.OP1/1 3.01 ILE163:A.N/1
DA5:C.OP1/1 2.48 TYR196:A.OH/1
DA5:C.OP1/1 2.97 ARG191:B.NH2/1
DA5:C.OP2/1 3.17 ARG191:B.NH1/1
DA5:C.OP2/1 3.09 ARG191:B.NH2/1
DG6:C.OP1/1 2.78 GLU179:B.OE1/1
DG6:C.OP1/1 2.3 LYS181:A.NZ/1
DG6:C.OP1/1 3.23 GLN192:A.NE2/1
DG6:C.OP2/1 3.25 GLN192:A.OE1/1
DG7:C.OP1/1 3.22 GLU132:B.N/1
DG7:C.OP1/1 2.89 GLU132:A.N/1
DT8:C.O2/1 2.8 ARG44:B.NH2/1
DT8:C.O2/1 3.23 GLU103:B.OE2/1
DT8:C.O4/1 2.61 ASN76:A.ND2/1
DT8:C.O4/1 2.35 ASN76:B.ND2/1
DT8:C.O4/1 3.16 TRP77:B.N/1
DC9:C.OP1/1 3.16 ARG183:A.NH1/1
DC9:C.OP2/1 2.96 ARG182:B.NH1/1
DC9:C.OP2/1 2.65 ARG182:A.NH1/1
DC10:C.OP1/1 2.81 ARG44:A.NH2/1
DC10:C.OP1/1 3 TRP77:A.NE1/1
DC10:C.OP1/1 3.08 ARG44:B.NH2/1
DC10:C.OP1/1 2.87 TRP77:B.NE1/1
DC10:C.OP2/1 3.03 ARG44:A.NH1/1
DC10:C.OP2/1 2.73 ARG44:B.NH1/1
DC11:C.OP1/1 3.16 ARG72:B.N/1
DC11:C.OP1/1 2.55 ARG72:A.N/1
DG12:C.OP2/1 3.19 LYS71:B.NZ/1
DA3:D.OP1/1 3.16 SER219:A.N/1
DA3:D.OP2/1 3.09 ARG184:B.NH1/1
DA3:D.OP2/1 2.89 ARG184:A.NH1/1
DC4:D.OP2/1 2.51 THR218:B.OG1/1
DC4:D.OP2/1 2.88 THR218:A.OG1/1
DC4:D.OP2/1 3.35 GLY220:A.N/1
DG5:D.OP1/1 2.84 ILE163:A.N/1
DG5:D.OP1/1 3.05 ILE163:B.N/1
DG5:D.OP1/1 2.81 TYR196:B.OH/1
DG5:D.OP2/1 2.57 ARG191:A.NH2/1
DG6:D.OP1/1 2.75 GLU179:A.OE1/1
DG6:D.OP1/1 2.75 GLU179:B.OE1/1
DG6:D.OP1/1 2.75 LYS181:B.NZ/1
DG6:D.OP1/1 3.17 GLN192:B.NE2/1
DG6:D.OP2/1 3.02 GLN192:B.OE1/1
DG7:D.OP1/1 2.91 GLU132:A.N/1
DG7:D.OP1/1 3.18 GLU132:B.N/1
DG8:D.O6/1 2.78 ASN76:B.ND2/1
DG8:D.O6/1 3.17 ASN76:A.ND2/1
DG8:D.O6/1 2.64 TRP77:A.N/1
DG8:D.N2/1 2.57 GLN78:B.OE1/1
DG8:D.N2/1 2.93 GLU103:B.OE1/1
DG8:D.N2/1 2.31 GLN78:A.OE1/1
DG8:D.N2/1 3.16 GLU103:A.OE2/1
DG8:D.N3/1 3.18 TYR41:B.OH/1
DG8:D.N3/1 3.41 GLU103:B.OE2/1
DG8:D.N3/1 2.94 TYR41:A.OH/1
DG8:D.N3/1 3.3 GLU103:A.OE1/1
DC9:D.OP1/1 3.32 ARG44:A.NH1/1
DC9:D.OP1/1 2.59 ARG183:B.NH1/1
DC9:D.OP2/1 2.7 ARG182:A.NH1/1
DC9:D.OP2/1 3 ARG182:B.NH1/1
DC10:D.OP1/1 3.1 ARG44:B.NH2/1
DC10:D.OP1/1 2.88 TRP77:B.NE1/1
DC10:D.OP1/1 2.72 ARG44:A.NH2/1
DC10:D.OP1/1 2.79 TRP77:A.NE1/1
DC10:D.OP2/1 2.75 ARG44:B.NH1/1
DC10:D.OP2/1 2.88 ARG44:A.NH1/1
DT11:D.OP1/1 2.55 ARG72:A.N/1
DT11:D.OP1/1 2.8 ARG72:B.N/1
DA12:D.OP2/1 2.82 LYS71:B.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG7:C.OP2/1 2.86 201:C/1 3.13 GLU132:B.OE2/1
DG7:C.OP2/1 2.86 201:C/1 3.17 ARG182:B.N/1
DC10:C.N4/1 2.66 401:A/1 2.59 ARG183:A.NH2/1
DG7:D.OP2/1 2.88 201:C/1 3.17 ARG182:B.N/1
DC10:D.N4/1 3.13 401:A/1 2.59 ARG183:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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