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Nucleic atom dist Protein atom
DA103:L.N3/1 2.84 LYS121:A.NZ/1
DC104:L.OP2/1 2.71 THR70:A.OG1/1
DC104:L.O3'/1 3.15 LYS121:A.N/1
DC104:L.O2/1 3 LYS121:A.NZ/1
DC104:L.N4/1 2.91 ASN67:A.OD1/1
DC105:L.OP1/1 3.12 LYS121:A.N/1
DC105:L.N4/1 2.96 GLU71:A.OE2/1
DC106:L.OP2/1 2.85 ARG10:A.NH1/1
DG107:L.OP1/1 2.6 LYS201:A.NZ/1
DG107:L.N7/1 2.95 ARG15:A.NH1/1
DG107:L.O6/1 2.86 ARG15:A.NH1/1
DT108:L.O4/1 2.75 SER204:A.OG/1
DC202:M.OP1/1 3.05 ARG211:A.NH1/1
DC203:M.OP2/1 2.96 ASN215:A.ND2/1
DA204:M.OP1/1 2.84 ASN20:A.N/1
DA204:M.OP2/1 2.99 LYS19:A.N/1
DA204:M.N7/1 2.95 GLN208:A.NE2/1
DA204:M.N6/1 3.57 ARG15:A.NH1/1
DA204:M.N6/1 2.87 GLN208:A.OE1/1
DC205:M.OP1/1 2.88 HIS68:A.NE2/1
DG206:M.OP2/1 3.01 THR61:A.N/1
DG206:M.OP2/1 2.92 THR61:A.OG1/1
DG206:M.OP2/1 2.78 THR64:A.OG1/1
DG207:M.N7/1 3.07 LYS63:A.NZ/1
DG207:M.O6/1 2.97 ASN67:A.ND2/1
DG208:M.O6/1 2.75 LYS63:A.NZ/1
DC211:M.OP1/1 3.11 LEU122:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA103:L.OP2/1 2.87 228:L/1 2.98 ARG69:A.NH2/1
DA103:L.N6/1 3.12 503:A/1 2.92 LYS63:A.NZ/1
DC104:L.OP1/1 2.69 210:L/1 2.73 THR70:A.O/1
DC105:L.OP1/1 2.72 215:L/1 3.23 LYS128:A.NZ/1
DC105:L.OP2/1 2.63 207:L/1 2.78 THR12:A.OG1/1
DC105:L.OP2/1 2.63 207:L/1 2.81 ASP120:A.OD1/1
DC106:L.OP1/1 2.55 204:L/1 2.61 TYR205:A.OH/1
DC106:L.OP2/1 2.87 227:L/1 3.1 ARG10:A.NH2/1
DC106:L.OP2/1 2.71 214:L/1 2.87 THR12:A.OG1/1
DC106:L.N4/1 3.28 403:A/1 2.9 ARG15:A.N/1
DC106:L.N4/1 3.06 338:A/1 2.61 ARG15:A.O/1
DC106:L.N4/1 3.06 338:A/1 2.76 LYS17:A.NZ/1
DG107:L.OP2/1 2.71 213:L/1 2.93 ARG15:A.NH2/1
DG107:L.OP2/1 2.88 453:A/1 2.83 GLU202:A.N/1
DG107:L.OP2/1 2.71 213:L/1 2.92 SER204:A.OG/1
DC202:M.OP2/1 2.68 311:M/1 2.79 LYS157:A.NZ/1
DC202:M.OP2/1 2.68 311:M/1 2.89 ARG211:A.NH1/1
DC203:M.OP2/1 2.86 320:M/1 2.96 GLU212:A.OE2/1
DA204:M.OP1/1 2.97 487:A/1 2.88 MET21:A.N/1
DA204:M.OP2/1 2.62 307:M/1 2.86 GLU212:A.OE2/1
DC205:M.OP2/1 2.8 316:M/1 2.81 LYS17:A.NZ/1
DC205:M.N4/1 3.04 331:M/1 3.06 GLY16:A.O/1
DC205:M.N4/1 3.04 331:M/1 3.38 LYS17:A.NZ/1
DG206:M.OP1/1 2.7 313:A/1 2.44 GLU59:A.O/1
DG206:M.OP1/1 2.7 313:A/1 3.12 GLU59:A.O/1
DG206:M.N7/1 2.86 316:M/1 2.81 LYS17:A.NZ/1
DC211:M.OP1/1 2.72 312:M/1 3.04 ASP123:A.N/1
DC211:M.OP1/1 2.72 312:M/1 3.22 ASP123:A.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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