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Nucleic atom dist Protein atom
DG1:D.OP2/1 2.47 ARG308:A.NH2/1
DG1:D.OP2/1 2.57 LYS312:A.NZ/1
DC2:D.OP1/1 2.87 GLY306:A.N/1
DC2:D.OP1/1 2.89 MET309:A.N/1
DC3:D.OP1/1 2.5 GLY304:A.N/1
DT4:P.OP1/1 2.81 GLY345:A.N/1
DT4:P.OP1/1 2.87 THR348:A.N/1
DT4:P.OP1/1 2.65 THR348:A.OG1/1
DT4:P.OP2/1 3.04 LYS347:A.N/1
DA5:P.OP1/1 2.75 GLY343:A.N/1
DA6:P.OP1/1 3.16 TRP342:A.NE1/1
DA6:P.N3/1 2.84 TYR505:A.OH/1
DT7:P.OP1/1 2.61 ASP427:A.OD2/1
DT7:P.OP1/1 2.62 ASP429:A.OD1/1
DT7:P.O2/1 2.87 ASN513:A.ND2/1
DG3:T.OP1/1 2.86 HIS541:A.ND1/1
DC4:T.OP1/1 2.64 LYS521:A.NZ/1
DA5:T.OP1/1 2.99 ARG514:A.NH2/1
DA5:T.OP2/1 2.87 ARG514:A.NE/1
DA5:T.N3/1 3.09 ARG517:A.NH1/1
DT7:T.OP2/1 3.27 LYS544:A.NZ/1
DT7:T.O3'/1 3.38 HIS530:A.NE2/1
DA8:T.OP1/1 2.81 GLN471:A.NE2/1
DA8:T.OP1/1 2.83 HIS530:A.NE2/1
DC9:T.OP1/1 2.84 GLN471:A.N/1
DC9:T.OP1/1 3.21 LYS472:A.N/1
DT10:T.OP1/1 3.02 SER463:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:D.O5'/1 3.01 101:D/1 2.67 TYR267:A.OH/1
DG1:D.O5'/1 3.01 101:D/1 2.51 TYR279:A.OH/1
DC2:D.OP2/1 2.76 107:D/1 2.87 ARG308:A.N/1
DA5:P.OP2/1 2.74 113:P/1 2.96 SER339:A.O/1
DA5:P.N3/1 2.86 118:P/1 3.02 LYS472:A.NZ/1
DA6:P.OP1/1 2.6 104:P/1 2.97 ARG488:A.NH1/1
DA6:P.OP1/1 3.16 111:P/1 2.82 ARG488:A.NH1/1
DA6:P.OP1/1 2.6 104:P/1 2.87 ASP490:A.OD2/1
DA6:P.O4'/1 3.17 118:P/1 3.02 LYS472:A.NZ/1
DT7:P.OP2/1 2.7 111:P/1 2.82 ARG488:A.NH1/1
DG3:T.OP1/1 2.82 133:T/1 3.03 THR540:A.O/1
DC4:T.OP2/1 2.64 112:T/1 2.84 HIS541:A.O/1
DA5:T.OP2/1 2.51 104:T/1 3 LYS281:A.NZ/1
DA5:T.N7/1 2.71 764:A/1 2.65 LYS273:A.NZ/1
DA5:T.N7/1 2.71 764:A/1 3.42 ARG514:A.NH2/1
DT7:T.OP1/1 2.82 734:A/1 2.57 SER526:A.OG/1
DT7:T.OP1/1 2.65 748:A/1 2.61 SER528:A.OG/1
DT7:T.O2/1 2.68 115:T/1 3.12 LYS472:A.NZ/1
DC9:T.OP1/1 2.91 845:A/1 2.89 GLN464:A.N/1
DC9:T.OP1/1 2.91 845:A/1 2.86 LYS472:A.O/1
DC9:T.OP2/1 3.09 714:A/1 2.44 GLN464:A.NE2/1
DC9:T.OP2/1 2.56 107:T/1 2.93 GLN471:A.NE2/1
DC9:T.O2/1 2.93 807:A/1 2.73 GLN372:A.NE2/1
DT10:T.OP2/1 2.78 128:T/1 2.9 GLU466:A.OE1/1
DT10:T.O4'/1 3.07 807:A/1 2.73 GLN372:A.NE2/1
DG11:T.OP1/1 2.52 105:T/1 2.99 THR371:A.N/1
DG11:T.OP1/1 2.52 105:T/1 2.9 THR371:A.OG1/1
DG11:T.OP1/1 2.94 140:T/1 2.95 GLN372:A.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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