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Nucleic atom dist Protein atom
DC4:B.OP1/1 2.62 LYS521:A.NZ/1
DC9:B.OP1/1 2.81 GLU466:A.N/1
DC9:B.OP1/1 2.82 GLU466:A.N/1
DT4:C.OP1/1 2.88 GLY345:A.N/1
DT4:C.OP1/1 2.91 THR348:A.N/1
DT4:C.OP1/1 2.78 THR348:A.OG1/1
DT4:C.OP2/1 3.03 LYS347:A.N/1
DA5:C.OP1/1 2.81 GLY343:A.N/1
DC6:C.OP1/1 3.15 TRP342:A.NE1/1
DC6:C.OP1/1 2.75 ARG488:A.NH2/1
DC6:C.O3'/1 2.96 LYS472:A.NZ/1
DG1:D.OP1/1 2.74 TYR267:A.OH/1
DG1:D.OP1/1 2.77 TYR279:A.OH/1
DG1:D.OP1/1 3.37 LYS324:A.NZ/1
DG1:D.OP2/1 3.17 ARG275:A.NE/1
DC2:D.OP1/1 2.82 GLY306:A.N/1
DC2:D.OP1/1 3.04 MET309:A.N/1
DC2:D.OP2/1 3.2 ARG308:A.NE/1
DC3:D.OP1/1 2.52 GLY304:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:B.N2/1 2.98 736:A/1 2.62 GLU529:A.OE1/1
DA8:B.OP1/1 3.07 728:A/1 2.58 ASN467:A.OD1/1
DA8:B.OP1/1 2.9 119:B/1 2.94 GLY468:A.N/1
DA8:B.N3/1 2.89 782:A/1 2.74 GLU465:A.OE2/1
DC9:B.OP1/1 2.56 105:B/1 2.83 GLN464:A.O/1
DC9:B.OP2/1 2.84 807:A/1 2.92 GLU466:A.O/1
DC9:B.OP2/1 2.84 807:A/1 2.81 GLU466:A.O/1
DC9:B.O4'/1 2.99 782:A/1 2.74 GLU465:A.OE2/1
DG3:C.OP1/1 2.9 109:C/1 3.19 LYS347:A.NZ/1
DA5:C.OP2/1 2.76 107:C/1 3.09 SER339:A.O/1
DC6:C.OP1/1 2.96 112:C/1 3.13 ARG488:A.NE/1
DC6:C.O3'/1 2.6 721:A/1 2.85 ASP429:A.OD2/1
DC6:C.O3'/1 2.6 721:A/1 2.52 ASP490:A.OD2/1
DC6:C.O2/1 2.9 110:C/1 2.98 TYR505:A.OH/1
DG1:D.N7/1 2.78 718:A/1 2.5 ARG275:A.NH2/1
DC2:D.OP2/1 2.58 101:D/1 3.05 ARG308:A.N/1
DC2:D.N4/1 3.03 103:D/1 3.15 ARG308:A.NH2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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