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Nucleic atom dist Protein atom
DC4:F.OP1/1 3.21 LYS521:E.NZ/1
DC9:F.OP1/1 2.83 GLU466:E.N/1
DT4:G.OP1/1 2.73 GLY345:E.N/1
DT4:G.OP1/1 2.92 THR348:E.N/1
DT4:G.OP1/1 2.72 THR348:E.OG1/1
DT4:G.OP2/1 3.08 LYS347:E.N/1
DA5:G.OP1/1 2.72 GLY343:E.N/1
DC6:G.OP1/1 3.23 TRP342:E.NE1/1
DC6:G.OP1/1 2.58 ARG488:E.NH2/1
DC6:G.O3'/1 2.84 LYS472:E.NZ/1
DG1:H.OP1/1 2.8 TYR267:E.OH/1
DG1:H.OP1/1 2.72 TYR279:E.OH/1
DC2:H.OP1/1 2.98 GLY306:E.N/1
DC2:H.OP1/1 2.91 MET309:E.N/1
DC3:H.OP1/1 2.7 GLY304:E.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG6:F.N2/1 3.07 735:E/1 3.01 ASN467:E.ND2/1
DG6:F.N2/1 3.07 735:E/1 2.7 GLU529:E.OE2/1
DA8:F.OP1/1 2.9 110:F/1 2.92 ASN467:E.OD1/1
DA8:F.N3/1 2.95 705:E/1 2.42 GLU465:E.OE2/1
DC9:F.OP1/1 2.99 781:E/1 2.91 GLN464:E.O/1
DC9:F.OP2/1 2.86 755:E/1 2.78 GLU466:E.O/1
DC9:F.O4'/1 3.01 705:E/1 2.42 GLU465:E.OE2/1
DC6:G.OP1/1 2.73 104:G/1 3.12 TRP342:E.NE1/1
DC6:G.OP1/1 2.73 104:G/1 2.83 ARG488:E.NE/1
DC6:G.O3'/1 2.77 710:E/1 2.71 ASP429:E.OD2/1
DC6:G.O3'/1 2.77 710:E/1 2.51 ASP490:E.OD2/1
DC2:H.OP2/1 2.73 104:H/1 2.97 LYS307:E.N/1
DC2:H.OP2/1 2.73 104:H/1 2.99 ARG308:E.N/1
DC3:H.OP1/1 2.75 747:E/1 2.74 ILE302:E.O/1
DC3:H.OP1/1 2.75 747:E/1 3.23 ILE305:E.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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