Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC4:J.OP1/1 2.8 LYS521:I.NZ/1
DC9:J.OP1/1 2.8 GLU466:I.N/1
DT4:K.OP1/1 2.72 GLY345:I.N/1
DT4:K.OP1/1 2.97 THR348:I.N/1
DT4:K.OP1/1 2.66 THR348:I.OG1/1
DT4:K.OP2/1 3.04 LYS347:I.N/1
DA5:K.OP1/1 2.83 GLY343:I.N/1
DC6:K.OP1/1 3 TRP342:I.NE1/1
DC6:K.OP1/1 2.88 ARG488:I.NH2/1
DC6:K.O3'/1 2.91 LYS472:I.NZ/1
DG1:L.OP1/1 2.98 TYR267:I.OH/1
DG1:L.OP1/1 2.46 TYR279:I.OH/1
DG1:L.OP2/1 3.31 ARG275:I.NE/1
DG1:L.OP2/1 3.13 ARG308:I.NH2/1
DC2:L.OP1/1 2.95 GLY306:I.N/1
DC2:L.OP1/1 3.01 MET309:I.N/1
DC3:L.OP1/1 2.82 GLY304:I.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG6:J.N2/1 2.84 112:J/1 2.96 GLU529:I.OE2/1
DA8:J.OP1/1 2.67 106:J/1 2.99 GLY468:I.N/1
DA8:J.N3/1 2.83 772:I/1 2.79 GLU465:I.OE2/1
DC9:J.OP2/1 2.84 749:I/1 2.73 GLU466:I.O/1
DC6:K.O3'/1 2.69 708:I/1 2.52 ASP490:I.OD2/1
DC6:K.O2/1 2.84 773:I/1 2.79 TYR505:I.OH/1
DG1:L.N2/1 2.97 103:L/1 3.3 LYS281:I.NZ/1
DC2:L.OP2/1 2.74 102:L/1 3.24 ARG308:I.N/1
DC2:L.O4'/1 2.8 103:L/1 3.3 LYS281:I.NZ/1
DC3:L.OP1/1 2.83 745:I/1 2.72 ILE302:I.O/1
DC3:L.OP1/1 2.83 745:I/1 3.14 ILE305:I.O/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text