Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC4:N.OP1/1 2.57 LYS521:M.NZ/1
DC9:N.OP1/1 2.76 GLU466:M.N/1
DT4:O.OP1/1 2.85 GLY345:M.N/1
DT4:O.OP1/1 2.93 THR348:M.N/1
DT4:O.OP1/1 2.56 THR348:M.OG1/1
DT4:O.OP2/1 2.87 LYS347:M.N/1
DA5:O.OP1/1 2.78 GLY343:M.N/1
DC6:O.OP1/1 3.06 TRP342:M.NE1/1
DC6:O.OP1/1 2.76 ARG488:M.NH2/1
DC6:O.O3'/1 2.93 LYS472:M.NZ/1
DG1:P.OP1/1 2.83 TYR267:M.OH/1
DG1:P.OP1/1 2.64 TYR279:M.OH/1
DG1:P.OP2/1 3.09 ARG275:M.NE/1
DG1:P.OP2/1 3.32 ARG308:M.NH2/1
DC2:P.OP1/1 2.9 GLY306:M.N/1
DC2:P.OP1/1 2.84 MET309:M.N/1
DC3:P.OP1/1 2.85 GLY304:M.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DG6:N.N2/1 2.98 883:M/1 3.08 ASN467:M.ND2/1
DG6:N.N2/1 2.98 883:M/1 2.94 GLU529:M.OE2/1
DA8:N.OP1/1 2.84 119:N/1 3.07 GLY468:M.N/1
DA8:N.N3/1 2.95 816:M/1 2.79 GLU465:M.OE2/1
DC9:N.OP1/1 2.74 110:N/1 3.1 GLN464:M.O/1
DC9:N.OP2/1 2.78 116:N/1 3 GLU466:M.O/1
DC9:N.O4'/1 3.08 816:M/1 2.79 GLU465:M.OE2/1
DC6:O.OP1/1 3.13 117:O/1 3.15 ARG488:M.NE/1
DC6:O.O3'/1 2.6 105:O/1 2.67 ASP429:M.OD2/1
DC6:O.O3'/1 2.6 105:O/1 2.66 ASP490:M.OD2/1
DC6:O.O2/1 2.97 874:M/1 2.9 TYR505:M.OH/1
DG1:P.OP2/1 2.21 101:P/1 3.23 ARG308:M.NE/1
DG1:P.OP2/1 2.21 101:P/1 2.88 ARG308:M.NH2/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text