Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA6:F.OP1/1 2.85 THR278:C.OG1/1
DC7:F.OP1/1 2.82 ASN176:C.ND2/1
DC7:F.OP1/1 2.79 TYR263:C.OH/1
DC7:F.O3'/1 3.09 GLU3:C.OE2/1
DG8:F.OP1/1 2.64 LYS54:C.NZ/1
DG8:F.OP2/1 3.42 ASN176:C.N/1
DG8:F.OP2/1 2.81 ARG277:C.NH1/1
DT9:F.OP1/1 3.07 ARG133:C.NH2/1
DT9:F.OP2/1 2.92 LYS54:C.NZ/1
DC10:F.OP2/1 2.88 ARG78:C.NH1/1
DC21:F.OP1/1 3.08 ARG119:C.NH1/1
DC21:F.O3'/1 2.73 ARG119:C.NH2/1
DC21:F.O2/1 2.87 ARG118:C.NE/1
DC21:F.N3/1 3.18 ARG118:C.NH2/1
DT22:F.OP1/1 2.87 ARG119:C.NH2/1
DG23:F.OP1/1 2.57 HIS96:C.NE2/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

text