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Nucleic atom dist Protein atom
DG3:X.OP2/1 2.93 ARG286:M.NH2/1
DG3:X.O5'/1 2.91 ARG286:M.NH1/1
DG4:X.OP1/1 2.39 ARG290:M.NH1/1
DC8:X.OP1/1 2.39 HIS343:N.NE2/1
DA11:X.OP1/1 2.75 ARG193:M.NH1/1
DA11:X.OP2/1 3.25 ARG193:M.NH2/1
DT12:X.OP1/1 2.63 LYS196:M.NZ/1
DA13:X.OP1/1 2.95 ARG294:P.NH1/1
DA13:X.OP1/1 2.62 ARG294:P.NH2/1
DA13:X.O4'/1 2.73 THR313:P.OG1/1
DA13:X.N3/1 3.05 ASN257:P.ND2/1
DG17:X.OP1/1 3.06 SER216:P.OG/1
DG19:X.O3'/1 3.33 LYS174:T.NZ/1
DG27:X.OP1/1 2.29 LYS57:Q.NZ/1
DG27:X.N2/1 3.04 HIS229:T.NE2/1
DA33:X.N6/1 2.51 SER99:M.OG/1
DT35:X.N3/1 2.85 LYS86:M.NZ/1
DT36:X.OP1/1 2.83 TYR262:B.OH/1
DT41:X.O5'/1 2.94 LYS494:B.NZ/1
DG45:X.OP2/1 3.06 LYS1135:A.NZ/1
DC46:X.OP1/1 2.99 SER1131:A.OG/1
DC46:X.OP1/1 2.37 LYS1132:A.N/1
DC46:X.OP1/1 3.17 LYS1133:A.N/1
DC50:X.OP2/1 3.33 ARG108:A.NH1/1
DG51:X.OP2/1 3.06 ARG190:A.NH2/1
DT57:X.OP1/1 3.25 ILE84:E.N/1
DC48:Y.O2/1 3.26 ARG1416:A.NH2/1
DG49:Y.OP1/1 3.13 GLU1433:A.O/1
DG53:Y.OP2/1 2.24 ARG1085:B.NH2/1
DA54:Y.OP2/1 2.44 ASN57:M.ND2/1
DA54:Y.N7/1 2.82 ASN57:M.O/1
DG55:Y.OP1/1 2.47 LYS1052:B.NZ/1
DG55:Y.N2/1 2.87 SER56:M.O/1
DG56:Y.N7/1 2.89 SER56:M.OG/1
DA57:Y.N6/1 3.34 SER56:M.OG/1
DA60:Y.OP1/1 3.23 ASN188:B.ND2/1
DA60:Y.O3'/1 2.86 ASP442:B.OD2/1
DA61:Y.OP1/1 2.97 ASP442:B.OD2/1
DC62:Y.OP1/1 2.73 LYS119:M.NZ/1
DG63:Y.O4'/1 2.71 ARG104:M.NH1/1
DG63:Y.O6/1 2.19 LYS331:A.NZ/1
DC64:Y.O4'/1 3.15 ASN103:M.ND2/1
DC68:Y.OP1/1 2.93 LYS230:T.NZ/1
DC69:Y.O5'/1 3.36 LYS214:T.NZ/1
DC75:Y.OP1/1 2.76 ARG154:M.NH1/1
DT77:Y.OP1/1 3.11 LYS169:T.NZ/1
DT78:Y.OP1/1 3.22 ARG196:P.NH1/1
DT78:Y.OP2/1 3.14 ARG196:P.NH2/1
DT79:Y.OP1/1 3.13 ARG344:N.NH1/1
DT79:Y.OP1/1 2.82 THR210:P.OG1/1
DT79:Y.OP2/1 2.3 ARG344:N.NH2/1
DT79:Y.O2/1 2.22 ASN167:P.ND2/1
DT80:Y.OP2/1 2.95 LYS346:N.NZ/1
DT80:Y.O5'/1 2.81 LYS346:N.NZ/1
DA83:Y.OP1/1 2.8 SER307:P.OG/1
DA83:Y.OP1/1 2.85 LYS309:P.NZ/1
DG84:Y.OP1/1 3.01 ARG248:M.NH2/1
DG85:Y.OP1/1 2.3 SER252:M.OG/1
DC86:Y.OP1/1 2.45 LYS178:M.NZ/1
DC86:Y.OP2/1 3.13 ALA281:M.N/1
DC86:Y.OP2/1 2.72 THR284:M.OG1/1
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Core number Atoms Action


Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).


W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).


CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
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