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Nucleic atom dist Protein atom
DC10:T.OP1/1 2.88 THR233:A.N/1
DC10:T.OP1/1 2.94 LYS234:A.N/1
DA11:T.OP1/1 3 LYS230:A.N/1
DC8:P.OP1/1 2.98 GLY107:A.N/1
DC8:P.OP1/1 2.83 ALA110:A.N/1
DC8:P.OP2/1 3.02 SER109:A.N/1
DG9:P.OP1/1 2.64 GLY105:A.N/1
DT10:P.OP1/1 3.06 ARG254:A.NH2/1
DG1:D.OP1/1 2.74 LYS68:A.NZ/1
DG1:D.OP2/1 2.81 LYS68:A.NZ/1
DT2:D.OP1/1 2.87 GLY66:A.N/1
DT2:D.OP1/1 2.83 ILE69:A.N/1
DT2:D.OP2/1 3.11 LYS68:A.N/1
DC3:D.OP1/1 2.86 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC5:T.O2/1 2.77 123:T/1 2.89 HIS34:A.O/1
DC10:T.OP2/1 2.72 114:T/1 2.87 GLU232:A.N/1
DC10:T.OP2/1 2.72 116:T/1 2.92 THR233:A.OG1/1
DT12:T.OP1/1 2.69 111:T/1 2.8 HIS134:A.N/1
DT12:T.OP1/1 2.93 714:A/1 2.92 HIS135:A.N/1
DG7:P.OP1/1 2.57 105:P/1 2.87 SER109:A.OG/1
DG9:P.OP2/1 2.7 114:P/1 3.16 THR101:A.O/1
DG9:P.N2/1 3.12 586:A/1 2.66 LYS234:A.NZ/1
DT10:P.OP1/1 2.7 607:A/1 2.69 SER104:A.OG/1
DT10:P.OP1/1 2.56 103:P/1 2.87 ASP190:A.OD2/1
DT10:P.OP1/1 2.7 607:A/1 3.08 ARG254:A.NE/1
DT10:P.O3'/1 2.7 615:A/1 2.7 ASP190:A.OD2/1
DT10:P.O3'/1 3.01 130:P/1 3.06 ASP256:A.OD2/1
DG1:D.OP1/1 2.89 697:A/1 2.88 LYS35:A.NZ/1
DG1:D.OP2/1 2.66 106:D/1 3.18 LYS72:A.NZ/1
DG1:D.N2/1 3.27 123:T/1 2.89 HIS34:A.O/1
DC3:D.OP2/1 2.85 116:D/1 3.22 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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