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Nucleic atom dist Protein atom
DG9:T.N3/1 3.25 LYS234:A.NZ/1
DC10:T.OP1/1 2.95 THR233:A.N/1
DC10:T.OP1/1 3.03 LYS234:A.N/1
DA11:T.OP1/1 2.91 LYS230:A.N/1
DC8:P.OP1/1 3 GLY107:A.N/1
DC8:P.OP1/1 2.88 ALA110:A.N/1
DC8:P.OP2/1 3.08 SER109:A.N/1
DG9:P.OP1/1 2.78 GLY105:A.N/1
DA10:P.OP1/1 3.07 ARG254:A.NH2/1
DG1:D.OP1/1 2.99 LYS68:A.NZ/1
DG1:D.OP2/1 2.97 LYS68:A.NZ/1
DT2:D.OP1/1 2.76 GLY66:A.N/1
DT2:D.OP1/1 2.92 ILE69:A.N/1
DT2:D.OP2/1 3.06 LYS68:A.N/1
DC3:D.OP1/1 2.87 GLY64:A.N/1
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Nucleic atom d_n2w water d_p2w Protein atom
DC5:T.O2/1 3.09 612:A/1 2.73 HIS34:A.O/1
DG7:T.N2/1 3.33 104:T/1 2.68 TYR271:A.OH/1
DG7:T.N2/1 3 660:A/1 2.81 GLU295:A.OE1/1
DG9:T.OP1/1 2.69 111:T/1 3.1 TYR296:A.OH/1
DC10:T.OP2/1 2.84 128:T/1 2.91 GLU232:A.N/1
DC10:T.OP2/1 2.9 687:A/1 2.89 THR233:A.OG1/1
DA11:T.O3'/1 2.97 120:T/1 2.99 HIS135:A.N/1
DT12:T.OP1/1 2.45 102:T/1 2.78 HIS134:A.N/1
DT12:T.OP1/1 2.79 120:T/1 2.99 HIS135:A.N/1
DG9:P.OP2/1 2.76 113:P/1 3.08 THR101:A.O/1
DG9:P.N3/1 2.85 124:P/1 3.25 LYS234:A.NZ/1
DA10:P.OP1/1 2.72 544:A/1 2.57 SER104:A.OG/1
DA10:P.OP1/1 2.61 105:P/1 2.83 ASP190:A.OD2/1
DA10:P.OP1/1 2.72 544:A/1 3.02 ARG254:A.NE/1
DA10:P.O3'/1 2.77 114:P/1 3.08 ASP190:A.OD1/1
DA10:P.O3'/1 2.77 114:P/1 2.97 ASP190:A.OD2/1
DA10:P.O3'/1 3.08 638:A/1 2.78 ASP256:A.OD2/1
DG1:D.OP1/1 2.74 110:D/1 2.92 LYS35:A.NZ/1
DG1:D.OP2/1 2.71 554:A/1 2.73 TYR39:A.OH/1
DG1:D.OP2/1 2.71 554:A/1 2.6 LYS72:A.NZ/1
DG1:D.OP2/1 2.89 595:A/1 2.7 LYS72:A.NZ/1
DG1:D.OP2/1 2.89 595:A/1 3.03 LYS84:A.NZ/1
DG1:D.N2/1 3.24 612:A/1 2.73 HIS34:A.O/1
DC3:D.OP2/1 2.95 114:D/1 3.1 LYS60:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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