Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DC10:T.OP1/1 2.96 THR233:A.N/1
DC10:T.OP1/1 3.03 LYS234:A.N/1
DA11:T.OP1/1 2.94 LYS230:A.N/1
DC8:P.OP1/1 3.02 GLY107:A.N/1
DC8:P.OP1/1 2.89 ALA110:A.N/1
DC8:P.OP2/1 3.09 SER109:A.N/1
DG9:P.OP1/1 2.79 GLY105:A.N/1
DT10:P.OP1/1 2.82 ARG254:A.NH2/1
DT10:P.O3'/1 2.91 ARG258:A.NH2/1
DT2:D.OP1/1 2.77 GLY66:A.N/1
DT2:D.OP1/1 2.86 ILE69:A.N/1
DT2:D.OP2/1 3.12 LYS68:A.N/1
DC3:D.OP1/1 2.82 GLY64:A.N/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DC5:T.O2/1 3.1 697:A/1 2.88 HIS34:A.O/1
DG9:T.O4'/1 3.19 766:A/1 3.12 LYS234:A.NZ/1
DC10:T.OP2/1 2.88 238:T/1 2.92 GLU232:A.N/1
DC10:T.OP2/1 2.88 611:A/1 2.73 THR233:A.OG1/1
DA11:T.O3'/1 3.05 219:T/1 2.94 HIS135:A.N/1
DT12:T.OP1/1 2.58 202:T/1 2.98 HIS134:A.N/1
DT12:T.OP1/1 2.74 219:T/1 2.94 HIS135:A.N/1
DG9:P.OP2/1 2.58 204:P/1 3.2 THR101:A.O/1
DG9:P.N2/1 3.1 233:P/1 3.2 LYS234:A.NZ/1
DT10:P.OP1/1 2.7 210:P/1 2.81 ARG254:A.NE/1
DT10:P.O3'/1 2.81 520:A/1 2.96 LYS234:A.NZ/1
DT10:P.O3'/1 2.81 520:A/1 2.58 ARG258:A.NH1/1
DT10:P.O3'/1 2.81 520:A/1 3.11 ARG258:A.NH2/1
DG1:D.OP1/1 2.74 111:D/1 2.94 LYS35:A.NZ/1
DG1:D.OP2/1 2.99 560:A/1 2.8 TYR39:A.OH/1
DG1:D.OP2/1 2.99 560:A/1 2.64 LYS72:A.NZ/1
DG1:D.OP2/1 2.58 106:D/1 2.67 LYS72:A.NZ/1
DG1:D.N2/1 3.17 697:A/1 2.88 HIS34:A.O/1
DC3:D.OP2/1 2.86 116:D/1 2.87 LYS60:A.NZ/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text