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Nucleic atom dist Protein atom
DC1:T.O3'/1 3.05 GLY327:A.N/1
DT4:T.OP2/1 3.16 ASN324:A.ND2/1
DT4:T.O2/1 2.78 GLN38:A.NE2/1
DA5:T.OP1/1 2.44 TYR39:A.OH/1
DA5:T.OP1/1 2.66 TYR39:A.OH/1
DA5:T.OP2/1 2.68 ASN324:A.N/1
DT6:T.OP1/1 2.73 ARG93:A.NH1/1
DT6:T.OP2/1 2.73 LYS86:A.NZ/1
DT6:T.OP2/1 3 SER322:A.N/1
DT6:T.O3'/1 3.16 ARG93:A.NH1/1
DG7:T.OP1/1 3.08 ARG93:A.NE/1
DG7:T.OP1/1 3.22 ARG351:A.NH2/1
DG7:T.OP2/1 2.89 GLY320:A.N/1
DA8:T.OP1/1 2.57 LYS317:A.N/1
DA8:T.OP2/1 2.6 THR318:A.OG1/1
DC9:T.OP1/1 3.26 ARG313:A.NH2/1
DC9:T.OP2/1 2.57 LYS317:A.NZ/1
DG10:T.OP1/1 3.42 LYS293:A.NZ/1
DG2:P.OP1/1 3.34 CYS384:A.N/1
DG2:P.OP2/1 3.44 CYS384:A.N/1
DC3:P.OP2/1 2.72 ARG382:A.N/1
DG4:P.OP1/1 3.22 ARG377:A.NH1/1
DG4:P.OP2/1 3.15 ARG377:A.NH1/1
DT5:P.OP1/1 3.14 LYS261:A.NZ/1
DC6:P.OP1/1 2.96 LEU262:A.N/1
DC6:P.OP2/1 2.74 LYS261:A.N/1
DA7:P.OP1/1 2.79 SER257:A.N/1
DA7:P.OP1/1 2.99 GLY259:A.N/1
DT8:P.OP1/1 3 LYS224:A.NZ/1
DT8:P.OP2/1 2.23 LYS224:A.NZ/1
DT8:P.O3'/1 2.62 SER113:A.OG/1
DT8:P.O3'/1 2.69 ASP115:A.OD2/1
DT8:P.O3'/1 3.16 GLU116:A.OE1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA2:T.N7/1 3 851:A/1 2.95 LYS328:A.N/1
DA2:T.N6/1 3.39 851:A/1 2.95 LYS328:A.N/1
DT3:T.OP2/1 2.71 108:T/1 3.01 TRP64:A.NE1/1
DT3:T.OP2/1 2.73 108:T/1 3.01 TRP64:A.NE1/1
DA5:T.OP1/1 2.73 112:T/1 2.74 SER322:A.O/1
DA5:T.OP1/1 3.07 695:A/1 2.73 LYS323:A.NZ/1
DA5:T.OP1/1 3.07 695:A/1 2.8 ASN324:A.O/1
DA5:T.OP2/1 2.82 627:A/1 2.82 SER322:A.OG/1
DA5:T.OP2/1 2.82 627:A/1 2.59 SER322:A.OG/1
DA5:T.O4'/1 2.82 618:A/1 2.87 GLN38:A.OE1/1
DA5:T.O4'/1 2.82 618:A/1 2.55 GLN38:A.OE1/1
DT6:T.OP1/1 2.68 107:T/1 2.9 LEU89:A.N/1
DT6:T.OP1/1 2.68 107:T/1 3 ARG93:A.NH2/1
DT6:T.OP1/1 2.68 107:T/1 2.75 GLU347:A.OE2/1
DG7:T.OP1/1 2.79 116:T/1 3.32 ARG93:A.NE/1
DG7:T.OP1/1 2.79 116:T/1 3.13 ARG111:A.NH2/1
DG7:T.OP1/1 2.56 104:T/1 3.02 THR318:A.O/1
DG7:T.OP1/1 2.56 104:T/1 2.72 ARG351:A.NH2/1
DG7:T.O3'/1 3.24 765:A/1 2.81 ARG313:A.NH2/1
DA8:T.OP1/1 2.86 765:A/1 3.21 ARG111:A.NH1/1
DA8:T.OP1/1 2.86 765:A/1 2.81 ARG313:A.NH2/1
DG2:P.N7/1 2.96 118:P/1 3.41 ARG382:A.NH2/1
DC6:P.OP1/1 2.85 770:A/1 2.82 SER257:A.O/1
DC6:P.OP1/1 2.85 770:A/1 2.81 GLY260:A.N/1
DC6:P.OP1/1 2.85 770:A/1 3.21 GLY263:A.N/1
DA7:P.OP1/1 2.71 108:P/1 2.99 ARG253:A.O/1
DT8:P.OP1/1 3.17 759:A/1 2.8 TYR118:A.OH/1
DT8:P.OP1/1 2.36 101:P/1 3.1 LYS224:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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