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Nucleic atom dist Protein atom
DC1:T.O3'/1 3.11 GLY327:A.N/1
DT4:T.OP2/1 3.25 ASN324:A.ND2/1
DT4:T.O2/1 2.77 GLN38:A.NE2/1
DA5:T.OP1/1 2.56 TYR39:A.OH/1
DA5:T.OP2/1 2.71 ASN324:A.N/1
DT6:T.OP1/1 2.73 ARG93:A.NH1/1
DT6:T.OP2/1 2.72 LYS86:A.NZ/1
DT6:T.OP2/1 3.01 SER322:A.N/1
DT6:T.OP2/1 3.24 SER322:A.O/1
DT6:T.O3'/1 3.25 ARG93:A.NH1/1
DG7:T.OP1/1 3.1 ARG93:A.NE/1
DG7:T.OP2/1 2.88 GLY320:A.N/1
DA8:T.OP1/1 2.54 LYS317:A.N/1
DA8:T.OP2/1 2.59 THR318:A.OG1/1
DC9:T.OP2/1 2.67 LYS317:A.NZ/1
DG2:P.OP2/1 3.28 CYS384:A.N/1
DC3:P.OP2/1 2.7 ARG382:A.N/1
DG4:P.OP1/1 3.03 ARG377:A.NH1/1
DG4:P.OP2/1 3.14 ARG377:A.NH1/1
DT5:P.OP1/1 3.04 LYS261:A.NZ/1
DC6:P.OP1/1 2.97 LEU262:A.N/1
DC6:P.OP2/1 2.77 LYS261:A.N/1
DA7:P.OP1/1 2.82 SER257:A.N/1
DA7:P.OP1/1 3.02 GLY259:A.N/1
DT8:P.OP1/1 2.9 LYS224:A.NZ/1
DT8:P.OP2/1 1.86 LYS224:A.NZ/1
DT8:P.O3'/1 3.17 ASP115:A.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT3:T.OP2/1 2.33 103:T/1 3.01 TRP64:A.NE1/1
DT3:T.OP2/1 2.91 103:T/1 3.01 TRP64:A.NE1/1
DA5:T.OP1/1 2.85 726:A/1 2.74 SER322:A.O/1
DA5:T.OP1/1 3.06 776:A/1 2.81 LYS323:A.NZ/1
DA5:T.OP1/1 3.06 776:A/1 2.83 ASN324:A.O/1
DA5:T.OP2/1 2.83 614:A/1 2.86 SER322:A.OG/1
DA5:T.OP2/1 2.83 614:A/1 2.5 SER322:A.OG/1
DA5:T.O4'/1 2.82 117:T/1 2.91 GLN38:A.OE1/1
DT6:T.OP1/1 2.76 678:A/1 2.9 LEU89:A.N/1
DT6:T.OP1/1 2.76 678:A/1 2.97 ARG93:A.NH2/1
DT6:T.OP1/1 2.76 678:A/1 2.68 GLU347:A.OE2/1
DG7:T.OP1/1 2.83 118:T/1 3.13 ARG111:A.NH2/1
DG7:T.OP1/1 2.62 106:T/1 2.97 THR318:A.O/1
DG7:T.OP2/1 2.86 759:A/1 2.79 THR318:A.OG1/1
DA8:T.OP1/1 2.78 696:A/1 3.24 ARG111:A.NH1/1
DA8:T.OP1/1 2.78 696:A/1 2.71 ARG313:A.NH1/1
DC9:T.OP1/1 3.16 609:A/1 2.48 ARG313:A.NE/1
DC11:T.OP1/1 2.22 101:T/1 3.3 LYS293:A.NZ/1
DC3:P.OP1/1 3.14 757:A/1 2.79 ARG377:A.NH1/1
DC6:P.OP1/1 2.86 718:A/1 2.74 SER257:A.O/1
DC6:P.OP1/1 2.86 718:A/1 2.9 GLY260:A.N/1
DC6:P.OP1/1 2.86 718:A/1 3.29 GLY263:A.N/1
DT8:P.O3'/1 3.29 709:A/1 2.73 ASP13:A.OD2/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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