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Nucleic atom dist Protein atom
DC1:T.O3'/1 3.4 GLY327:A.N/1
DT4:T.OP2/1 3.18 ASN324:A.ND2/1
DT4:T.O2/1 2.68 GLN38:A.NE2/1
DA5:T.OP1/1 2.57 TYR39:A.OH/1
DA5:T.OP2/1 2.72 ASN324:A.N/1
DT6:T.OP1/1 2.77 ARG93:A.NH1/1
DT6:T.OP2/1 2.75 LYS86:A.NZ/1
DT6:T.OP2/1 2.98 SER322:A.N/1
DT6:T.OP2/1 3.26 SER322:A.O/1
DT6:T.O3'/1 3.2 ARG93:A.NH1/1
DG7:T.OP1/1 3.09 ARG93:A.NE/1
DG7:T.OP2/1 2.91 GLY320:A.N/1
DA8:T.OP1/1 2.5 LYS317:A.N/1
DA8:T.OP2/1 2.63 THR318:A.OG1/1
DC9:T.OP2/1 2.75 LYS317:A.NZ/1
DG2:P.OP2/1 3.07 CYS384:A.N/1
DC3:P.OP2/1 2.67 ARG382:A.N/1
DG4:P.OP1/1 2.85 ARG377:A.NH1/1
DG4:P.OP2/1 3.14 ARG377:A.NH1/1
DT5:P.OP1/1 3.27 LYS261:A.NZ/1
DC6:P.OP1/1 2.98 LEU262:A.N/1
DC6:P.OP2/1 2.76 LYS261:A.N/1
DA7:P.OP1/1 2.8 SER257:A.N/1
DA7:P.OP1/1 3.03 GLY259:A.N/1
DT8:P.OP1/1 3.12 ARG256:A.NE/1
DT8:P.OP1/1 2.79 LYS224:A.NZ/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT3:T.OP2/1 2.34 102:T/1 2.94 TRP64:A.NE1/1
DT3:T.OP2/1 2.93 102:T/1 2.94 TRP64:A.NE1/1
DT3:T.O4'/1 3.18 622:A/1 2.55 SER62:A.O/1
DA5:T.OP1/1 2.75 111:T/1 2.76 SER322:A.O/1
DA5:T.OP1/1 3.05 764:A/1 2.8 LYS323:A.NZ/1
DA5:T.OP1/1 3.05 764:A/1 2.84 ASN324:A.O/1
DA5:T.OP2/1 2.79 626:A/1 3.02 SER322:A.OG/1
DA5:T.OP2/1 2.79 626:A/1 2.58 SER322:A.OG/1
DA5:T.O4'/1 2.88 120:T/1 2.92 GLN38:A.OE1/1
DT6:T.OP1/1 2.7 672:A/1 2.87 LEU89:A.N/1
DT6:T.OP1/1 2.7 672:A/1 2.97 ARG93:A.NH2/1
DT6:T.OP1/1 2.7 672:A/1 2.68 GLU347:A.OE2/1
DG7:T.OP1/1 2.8 115:T/1 3.12 ARG111:A.NH2/1
DG7:T.OP1/1 2.69 109:T/1 2.98 THR318:A.O/1
DA8:T.OP1/1 2.84 761:A/1 3.19 ARG111:A.NH1/1
DA8:T.OP1/1 2.84 761:A/1 2.79 ARG313:A.NH1/1
DC9:T.OP1/1 3.19 635:A/1 2.6 ARG313:A.NE/1
DC11:T.OP1/1 2.43 104:T/1 3.25 LYS293:A.NZ/1
DG2:P.OP2/1 2.54 102:P/1 3.08 ARG382:A.O/1
DC6:P.OP1/1 2.82 785:A/1 2.82 SER257:A.O/1
DC6:P.OP1/1 2.82 785:A/1 2.87 GLY260:A.N/1
DC6:P.OP1/1 2.82 785:A/1 3.27 GLY263:A.N/1
DA7:P.OP1/1 2.75 108:P/1 2.94 ARG253:A.O/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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