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Nucleic atom dist Protein atom
DC1:T.O3'/1 3.13 GLY327:A.N/1
DT3:T.O4/1 2.66 ARG61:A.NH1/1
DT4:T.O2/1 2.69 GLN38:A.NE2/1
DA5:T.OP1/1 2.55 TYR39:A.OH/1
DA5:T.OP2/1 2.7 ASN324:A.N/1
DT6:T.OP1/1 2.75 ARG93:A.NH1/1
DT6:T.OP2/1 2.75 LYS86:A.NZ/1
DT6:T.OP2/1 2.95 SER322:A.N/1
DT6:T.OP2/1 3.21 SER322:A.O/1
DT6:T.O3'/1 3.29 ARG93:A.NH1/1
DG7:T.OP1/1 3.24 ARG93:A.NE/1
DG7:T.OP1/1 3.26 ARG351:A.NH2/1
DG7:T.OP2/1 2.87 GLY320:A.N/1
DA8:T.OP1/1 2.41 LYS317:A.N/1
DA8:T.OP2/1 2.59 THR318:A.OG1/1
DC9:T.OP1/1 2.79 LYS311:A.NZ/1
DC9:T.OP1/1 3.39 ARG313:A.NH2/1
DG2:P.OP2/1 3.19 CYS384:A.N/1
DG2:P.OP2/1 3.19 CYS384:A.N/1
DG2:P.OP2/1 3.21 CYS384:A.N/1
DG2:P.OP2/1 3.21 CYS384:A.N/1
DC3:P.OP2/1 2.78 ARG382:A.N/1
DG4:P.OP1/1 3.13 ARG377:A.NH1/1
DG4:P.OP2/1 3.21 ARG377:A.NH1/1
DT5:P.OP1/1 3 LYS261:A.NZ/1
DC6:P.OP1/1 2.97 LEU262:A.N/1
DC6:P.OP2/1 2.8 LYS261:A.N/1
DA7:P.OP1/1 2.8 SER257:A.N/1
DA7:P.OP1/1 2.98 GLY259:A.N/1
DT8:P.OP1/1 2.85 LYS224:A.NZ/1
DT8:P.OP1/1 2.78 LYS224:A.NZ/1
DA9:P.OP1/1 2.95 ASP115:A.OD1/1
DA9:P.OP1/1 3.04 ASP115:A.OD2/1
DA9:P.O3'/1 3.18 PHE18:A.N/1
DA9:P.N6/1 3.28 ARG61:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA2:T.N7/1 3.27 784:A/1 2.82 LYS328:A.N/1
DA2:T.N6/1 3.25 784:A/1 2.82 LYS328:A.N/1
DT3:T.OP2/1 2.59 107:T/1 3.19 LYS43:A.NZ/1
DT3:T.OP2/1 2.59 107:T/1 3.1 TRP64:A.NE1/1
DT3:T.O4'/1 2.91 672:A/1 2.66 SER62:A.O/1
DT3:T.O2/1 2.29 103:T/1 2.94 GLN38:A.NE2/1
DT4:T.O4'/1 3.14 103:T/1 2.94 GLN38:A.NE2/1
DA5:T.OP1/1 2.81 724:A/1 2.74 SER322:A.O/1
DA5:T.OP1/1 3.04 685:A/1 2.83 ASN324:A.O/1
DA5:T.OP2/1 2.78 628:A/1 2.95 SER322:A.OG/1
DA5:T.OP2/1 2.78 628:A/1 2.55 SER322:A.OG/1
DA5:T.O4'/1 2.83 121:T/1 2.83 GLN38:A.OE1/1
DT6:T.OP1/1 2.7 113:T/1 2.91 LEU89:A.N/1
DT6:T.OP1/1 2.7 113:T/1 2.95 ARG93:A.NH2/1
DT6:T.OP1/1 2.7 113:T/1 2.72 GLU347:A.OE2/1
DG7:T.OP1/1 2.98 128:T/1 3.06 ARG111:A.NH2/1
DG7:T.OP1/1 2.43 104:T/1 3.05 THR318:A.O/1
DG7:T.OP1/1 2.43 104:T/1 2.52 ARG351:A.NH2/1
DG7:T.OP2/1 2.87 123:T/1 2.98 THR318:A.OG1/1
DA8:T.OP1/1 2.92 677:A/1 3.36 ARG111:A.NH1/1
DA8:T.OP1/1 2.92 677:A/1 2.68 ARG313:A.NH2/1
DG2:P.N7/1 2.76 213:P/1 3.38 ARG382:A.NH2/1
DC6:P.OP1/1 2.85 758:A/1 2.79 SER257:A.O/1
DC6:P.OP1/1 2.85 758:A/1 2.88 GLY260:A.N/1
DC6:P.OP1/1 2.85 758:A/1 3.27 LEU262:A.N/1
DC6:P.OP1/1 2.85 758:A/1 3.18 GLY263:A.N/1
DA7:P.OP1/1 2.8 217:P/1 2.94 ARG253:A.O/1
DA9:P.OP1/1 2.74 210:P/1 3.12 ASP13:A.OD2/1
DA9:P.OP1/1 2.74 210:P/1 2.83 LYS224:A.NZ/1
DA9:P.OP2/1 3.2 878:A/1 0.37 ARG61:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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