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Nucleic atom dist Protein atom
DC1:T.O3'/1 3.36 GLY327:A.N/1
DA5:T.OP1/1 2.51 TYR39:A.OH/1
DA5:T.OP2/1 2.69 ASN324:A.N/1
DT6:T.OP1/1 2.67 ARG93:A.NH1/1
DT6:T.OP2/1 2.71 LYS86:A.NZ/1
DT6:T.OP2/1 2.98 SER322:A.N/1
DT6:T.OP2/1 3.27 SER322:A.O/1
DT6:T.O3'/1 3.2 ARG93:A.NH1/1
DG7:T.OP1/1 3.13 ARG93:A.NE/1
DG7:T.OP2/1 2.83 GLY320:A.N/1
DA8:T.OP1/1 2.41 LYS317:A.N/1
DA8:T.OP2/1 2.54 THR318:A.OG1/1
DC9:T.OP2/1 2.56 LYS317:A.NZ/1
DC3:P.OP2/1 2.79 ARG382:A.N/1
DG4:P.OP2/1 3.37 ARG377:A.NH1/1
DT5:P.OP1/1 3.1 LYS261:A.NZ/1
DC6:P.OP1/1 2.93 LEU262:A.N/1
DC6:P.OP2/1 2.77 LYS261:A.N/1
DA7:P.OP1/1 2.81 SER257:A.N/1
DA7:P.OP1/1 3.14 GLY259:A.N/1
DA7:P.OP1/1 2.83 SER257:A.N/1
DA7:P.OP1/1 2.88 GLY259:A.N/1
DT8:P.OP1/1 2.18 ARG256:A.NH1/1
DT8:P.OP2/1 2.15 LYS224:A.NZ/1
DT8:P.O3'/1 2.91 SER113:A.OG/1
DT8:P.O3'/1 2.94 ASP115:A.OD1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DT3:T.OP2/1 2.2 102:T/1 3.01 TRP64:A.NE1/1
DT3:T.OP2/1 2.7 102:T/1 3.01 TRP64:A.NE1/1
DA5:T.OP1/1 2.76 114:T/1 2.8 SER322:A.O/1
DA5:T.OP1/1 2.9 633:A/1 2.59 LYS323:A.NZ/1
DA5:T.OP1/1 2.9 633:A/1 2.88 ASN324:A.O/1
DA5:T.OP2/1 2.82 615:A/1 2.85 SER322:A.OG/1
DA5:T.OP2/1 2.82 615:A/1 2.45 SER322:A.OG/1
DA5:T.OP2/1 2.82 615:A/1 3.22 ASN324:A.OD1/1
DA5:T.O4'/1 3.03 624:A/1 2.54 GLN38:A.NE2/1
DT6:T.OP1/1 2.77 660:A/1 2.89 LEU89:A.N/1
DT6:T.OP1/1 2.77 660:A/1 2.94 ARG93:A.NH2/1
DT6:T.OP1/1 2.77 660:A/1 2.67 GLU347:A.OE2/1
DG7:T.OP1/1 2.86 779:A/1 2.85 ARG111:A.NH2/1
DG7:T.OP1/1 2.46 107:T/1 3 THR318:A.O/1
DA8:T.OP1/1 3.09 723:A/1 3.23 ARG111:A.NH1/1
DA8:T.OP1/1 3.09 723:A/1 2.75 ARG313:A.NH1/1
DC9:T.OP1/1 2.82 613:A/1 2.44 ARG313:A.NE/1
DC9:T.OP1/1 2.82 613:A/1 2.82 ARG313:A.NH2/1
DC6:P.OP1/1 2.8 758:A/1 2.8 SER257:A.O/1
DC6:P.OP1/1 2.8 758:A/1 2.8 GLY260:A.N/1
DC6:P.OP1/1 2.8 758:A/1 3.2 GLY263:A.N/1
DA7:P.OP1/1 2.75 108:P/1 3.01 ARG253:A.O/1
DA7:P.OP1/1 2.79 108:P/1 3.01 ARG253:A.O/1
DT8:P.OP1/1 2.8 605:A/1 3.13 LYS224:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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