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Nucleic atom dist Protein atom
DC1:T.O3'/1 3.18 GLY327:A.N/1
DT4:T.O2/1 2.71 GLN38:A.NE2/1
DA5:T.OP1/1 2.58 TYR39:A.OH/1
DA5:T.OP2/1 2.62 ASN324:A.N/1
DT6:T.OP1/1 2.76 ARG93:A.NH1/1
DT6:T.OP2/1 2.69 LYS86:A.NZ/1
DT6:T.OP2/1 2.95 SER322:A.N/1
DT6:T.OP2/1 3.22 SER322:A.O/1
DT6:T.O3'/1 3.33 ARG93:A.NH1/1
DG7:T.OP1/1 3.31 ARG93:A.NE/1
DG7:T.OP1/1 3.16 ARG351:A.NH2/1
DG7:T.OP2/1 2.82 GLY320:A.N/1
DA8:T.OP1/1 2.54 LYS317:A.N/1
DA8:T.OP2/1 2.58 THR318:A.OG1/1
DC9:T.OP1/1 2.74 LYS311:A.NZ/1
DC9:T.OP1/1 3.3 ARG313:A.NH2/1
DG2:P.OP2/1 3.27 CYS384:A.N/1
DG2:P.OP2/1 3.27 CYS384:A.N/1
DG2:P.OP2/1 3.26 CYS384:A.N/1
DG2:P.OP2/1 3.26 CYS384:A.N/1
DC3:P.OP2/1 2.87 ARG382:A.N/1
DT5:P.OP1/1 3.07 LYS261:A.NZ/1
DC6:P.OP1/1 3 LEU262:A.N/1
DC6:P.OP2/1 2.79 LYS261:A.N/1
DA7:P.OP1/1 2.82 SER257:A.N/1
DA7:P.OP1/1 2.97 GLY259:A.N/1
DT8:P.OP1/1 3.07 LYS224:A.NZ/1
DT8:P.OP1/1 3.07 LYS224:A.NZ/1
DT8:P.O3'/1 3.23 SER113:A.OG/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA2:T.N7/1 3.32 705:A/1 2.7 LYS328:A.N/1
DA2:T.N6/1 3.25 705:A/1 2.7 LYS328:A.N/1
DT3:T.OP2/1 2.61 106:T/1 3.06 TRP64:A.NE1/1
DT3:T.O4'/1 2.67 111:T/1 2.8 SER62:A.O/1
DT3:T.O2/1 2.41 103:T/1 2.99 GLN38:A.NE2/1
DT4:T.O4'/1 3.02 103:T/1 2.99 GLN38:A.NE2/1
DA5:T.OP1/1 2.67 110:T/1 2.92 SER322:A.O/1
DA5:T.OP1/1 2.8 621:A/1 2.46 LYS323:A.NZ/1
DA5:T.OP1/1 2.8 621:A/1 2.94 ASN324:A.O/1
DA5:T.OP2/1 2.78 630:A/1 2.9 SER322:A.OG/1
DA5:T.OP2/1 2.78 630:A/1 2.51 SER322:A.OG/1
DT6:T.OP1/1 2.79 749:A/1 2.86 LEU89:A.N/1
DT6:T.OP1/1 2.79 749:A/1 3.03 ARG93:A.NH2/1
DT6:T.OP1/1 2.79 749:A/1 2.76 GLU347:A.OE2/1
DG7:T.OP1/1 2.79 116:T/1 3.31 ARG93:A.NE/1
DG7:T.OP1/1 2.79 116:T/1 3.24 ARG111:A.NH2/1
DG7:T.OP1/1 2.24 101:T/1 3.17 THR318:A.O/1
DG7:T.OP1/1 2.24 101:T/1 2.51 ARG351:A.NH2/1
DA8:T.OP1/1 2.82 649:A/1 2.61 ARG313:A.NH2/1
DC9:T.OP1/1 3.06 675:A/1 2.66 GLU110:A.OE1/1
DC6:P.OP1/1 2.87 754:A/1 2.83 SER257:A.O/1
DC6:P.OP1/1 2.87 754:A/1 2.77 GLY260:A.N/1
DC6:P.OP1/1 2.87 754:A/1 3.18 GLY263:A.N/1
DA7:P.OP1/1 2.81 115:P/1 2.97 ARG253:A.O/1
DT8:P.OP2/1 2.33 101:P/1 2.91 ARG61:A.NH1/1
DT8:P.OP2/1 2.38 101:P/1 2.91 ARG61:A.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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