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Nucleic atom dist Protein atom
DC1:T.O3'/1 3.23 GLY327:A.N/1
DT4:T.O2/1 2.94 GLN38:A.NE2/1
DA5:T.OP1/1 2.62 TYR39:A.OH/1
DA5:T.OP2/1 2.69 ASN324:A.N/1
DT6:T.OP1/1 2.83 ARG93:A.NH1/1
DT6:T.OP2/1 2.79 LYS86:A.NZ/1
DT6:T.OP2/1 2.91 SER322:A.N/1
DT6:T.OP2/1 3.18 SER322:A.O/1
DT6:T.O5'/1 3.3 SER322:A.OG/1
DT6:T.O3'/1 3.14 ARG93:A.NH1/1
DG7:T.OP1/1 3.06 ARG93:A.NE/1
DG7:T.OP1/1 3.31 ARG351:A.NH2/1
DG7:T.OP2/1 2.87 GLY320:A.N/1
DA8:T.OP1/1 2.73 LYS317:A.N/1
DA8:T.OP2/1 2.54 THR318:A.OG1/1
DC9:T.OP1/1 2.63 LYS311:A.NZ/1
DC9:T.OP1/1 3.39 ARG313:A.NH1/1
DC9:T.OP1/1 3.28 ARG313:A.NH2/1
DC9:T.OP2/1 3.12 LYS317:A.NZ/1
DG2:P.OP2/1 3.24 CYS384:A.N/1
DG2:P.OP2/1 3.24 CYS384:A.N/1
DG2:P.OP2/1 3.21 CYS384:A.N/1
DG2:P.OP2/1 3.21 CYS384:A.N/1
DC3:P.OP2/1 2.93 ARG382:A.N/1
DG4:P.OP2/1 3.27 ARG377:A.NH1/1
DT5:P.OP1/1 3.1 LYS261:A.NZ/1
DC6:P.OP1/1 2.92 LEU262:A.N/1
DC6:P.OP2/1 2.73 LYS261:A.N/1
DA7:P.OP1/1 2.8 SER257:A.N/1
DA7:P.OP1/1 3.03 GLY259:A.N/1
DA9:P.OP1/1 2.91 ASP115:A.OD1/1
DA9:P.O3'/1 3.19 PHE18:A.N/1
DA9:P.N6/1 3.48 ARG61:A.NH1/1
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Nucleic atom d_n2w water d_p2w Protein atom
DA2:T.N6/1 3.15 689:A/1 2.66 LYS328:A.N/1
DT3:T.OP2/1 2.25 102:T/1 2.9 TRP64:A.NE1/1
DT3:T.O4'/1 2.59 110:T/1 2.78 SER62:A.O/1
DT3:T.O2/1 2.65 112:T/1 3.09 GLN38:A.NE2/1
DT4:T.O4'/1 2.84 112:T/1 3.09 GLN38:A.NE2/1
DA5:T.OP1/1 2.92 766:A/1 2.78 SER322:A.O/1
DA5:T.OP1/1 2.86 604:A/1 2.33 LYS323:A.NZ/1
DA5:T.OP1/1 2.86 604:A/1 2.85 ASN324:A.O/1
DA5:T.OP2/1 2.88 633:A/1 3.02 SER322:A.OG/1
DA5:T.OP2/1 2.88 633:A/1 2.52 SER322:A.OG/1
DA5:T.O4'/1 2.98 731:A/1 2.72 GLN38:A.OE1/1
DT6:T.OP1/1 2.74 672:A/1 2.92 LEU89:A.N/1
DT6:T.OP1/1 2.74 672:A/1 2.93 ARG93:A.NH2/1
DT6:T.OP1/1 2.74 672:A/1 2.63 GLU347:A.OE2/1
DG7:T.OP1/1 2.89 124:T/1 3.07 ARG111:A.NH2/1
DG7:T.OP1/1 2.67 113:T/1 2.9 THR318:A.O/1
DG7:T.OP1/1 2.67 113:T/1 2.71 ARG351:A.NH2/1
DG7:T.OP2/1 2.47 106:T/1 3.25 THR318:A.OG1/1
DA8:T.OP1/1 2.61 614:A/1 2.44 ARG313:A.NH2/1
DC6:P.OP1/1 2.78 217:P/1 2.94 SER257:A.O/1
DC6:P.OP1/1 2.78 217:P/1 2.87 GLY260:A.N/1
DC6:P.OP1/1 2.78 217:P/1 3.19 LEU262:A.N/1
DC6:P.OP1/1 2.78 217:P/1 3.17 GLY263:A.N/1
DA9:P.OP1/1 2.65 211:P/1 3.14 ASP13:A.OD2/1
DA9:P.OP1/1 2.65 211:P/1 2.92 LYS224:A.NZ/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2019

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