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Nucleic atom dist Protein atom
DG2:B.N7/1 2.63 ARG430:A.NH2/1
DG2:B.O6/1 3.04 ARG430:A.NH1/1
DG4:B.OP1/1 2.69 HIS401:A.ND1/1
DG4:B.N7/1 2.94 ARG424:A.NH1/1
DG4:B.O6/1 2.9 ARG424:A.NH2/1
DT5:B.OP1/1 3.38 LYS381:A.NZ/1
DT5:B.O4/1 3.07 ARG424:A.NH1/1
DG6:B.O3'/1 3.07 ARG376:A.NH1/1
DG6:B.N7/1 2.85 HIS397:A.NE2/1
DG7:B.OP2/1 3.03 HIS373:A.ND1/1
DG7:B.N7/1 2.87 ARG394:A.NH1/1
DG7:B.O6/1 2.81 ARG394:A.NH2/1
DG8:B.N7/1 2.96 ARG372:A.NH2/1
DG8:B.O6/1 2.89 ARG372:A.NH1/1
DG10:B.O6/1 2.86 ARG366:A.NH2/1
DT11:B.O4/1 2.99 ARG366:A.NH1/1
DG4:C.OP1/1 3 LYS399:A.NZ/1
DC5:C.OP2/1 2.92 LYS399:A.NZ/1
DC5:C.N4/1 3.02 ASP396:A.OD2/1
DA8:C.N6/1 3.24 ARG424:A.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG2:B.OP2/1 2.72 611:A/1 2.56 GLU427:A.OE2/1
DC3:B.OP1/1 3.07 608:A/1 2.51 THR404:A.O/1
DC3:B.OP2/1 2.57 102:B/1 3.12 GLU427:A.OE1/1
DC3:B.N4/1 2.83 614:A/1 2.61 ASP426:A.OD2/1
DG4:B.OP2/1 2.95 624:A/1 2.77 HIS397:A.O/1
DG4:B.OP2/1 2.76 617:A/1 2.68 THR400:A.OG1/1
DG4:B.OP2/1 2.76 617:A/1 3.12 ARG424:A.NH1/1
DT5:B.OP2/1 2.78 612:A/1 3.23 LYS381:A.NZ/1
DT5:B.OP2/1 2.78 612:A/1 2.94 ARG390:A.NE/1
DT5:B.OP2/1 2.78 612:A/1 2.59 LYS391:A.O/1
DT5:B.OP2/1 2.84 628:A/1 2.83 SER393:A.N/1
DG8:B.OP2/1 2.95 112:B/1 3.11 LYS351:A.NZ/1
DG8:B.OP2/1 2.95 112:B/1 2.99 ARG363:A.O/1
DG10:B.N7/1 2.98 621:A/1 2.71 HIS369:A.NE2/1
DT1:C.O5'/1 3.09 604:A/1 2.81 SER367:A.OG/1
DT1:C.O5'/1 3.09 604:A/1 2.39 LYS371:A.NZ/1
DA2:C.N7/1 2.51 102:C/1 3.05 ASP368:A.OD2/1
5CM3:C.OP2/1 3.17 620:A/1 2.71 SER395:A.OG/1
DG4:C.OP2/1 3.04 629:A/1 2.84 SER395:A.O/1
DG4:C.N7/1 3.18 635:A/1 2.93 ARG372:A.NH1/1
DC7:C.OP2/1 2.72 104:C/1 3.19 SER425:A.OG/1
DC7:C.N4/1 3.19 616:A/1 2.67 ASP426:A.OD1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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