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Nucleic atom dist Protein atom
DG2:E.N7/1 2.77 ARG430:D.NH2/1
DG2:E.O6/1 2.91 ARG430:D.NH1/1
DG4:E.OP1/1 2.69 HIS401:D.ND1/1
DG4:E.N7/1 3 ARG424:D.NH1/1
DG4:E.O6/1 2.87 ARG424:D.NH2/1
DT5:E.O4/1 3.17 ARG424:D.NH1/1
DG6:E.N7/1 2.81 HIS397:D.NE2/1
DG7:E.OP2/1 3.03 HIS373:D.ND1/1
DG7:E.N7/1 2.88 ARG394:D.NH1/1
DG7:E.O6/1 2.75 ARG394:D.NH2/1
DG8:E.N7/1 3.02 ARG372:D.NH2/1
DG8:E.O6/1 2.92 ARG372:D.NH1/1
DG10:E.O6/1 2.7 ARG366:D.NH2/1
DT11:E.O4/1 2.89 ARG366:D.NH1/1
DA2:F.N6/1 2.97 ARG366:D.NH2/1
DC5:F.OP2/1 2.75 LYS399:D.NZ/1
DC5:F.N4/1 2.95 ASP396:D.OD2/1
DA8:F.N6/1 3.22 ARG424:D.NH2/1
DA8:F.N6/1 3.36 ASP426:D.OD2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG2:E.OP2/1 2.83 117:E/1 2.94 LYS409:D.NZ/1
DG2:E.OP2/1 2.83 117:E/1 2.88 LYS421:D.O/1
DG2:E.OP2/1 2.76 603:D/1 2.47 GLU427:D.OE2/1
DC3:E.N4/1 3.01 120:E/1 3.06 ASP426:D.OD2/1
DG4:E.OP2/1 3.11 624:D/1 2.79 HIS397:D.O/1
DG4:E.OP2/1 2.71 615:D/1 2.7 THR400:D.OG1/1
DT5:E.OP2/1 2.82 609:D/1 3.45 LYS381:D.NZ/1
DT5:E.OP2/1 2.82 609:D/1 3.01 ARG390:D.NE/1
DT5:E.OP2/1 2.82 609:D/1 2.54 LYS391:D.O/1
DT5:E.OP2/1 2.77 113:E/1 2.82 SER393:D.N/1
DG10:E.N7/1 2.71 111:E/1 2.94 HIS369:D.NE2/1
DT1:F.O5'/1 2.99 604:D/1 2.89 SER367:D.OG/1
DT1:F.O5'/1 2.99 604:D/1 2.48 LYS371:D.NZ/1
DA2:F.N7/1 2.58 207:F/1 2.87 ASP368:D.OD2/1
5CM3:F.OP2/1 3.1 622:D/1 2.75 SER395:D.OG/1
DG4:F.OP2/1 3.15 617:D/1 2.72 SER395:D.O/1
DG4:F.N7/1 3.15 634:D/1 2.85 ARG372:D.NH1/1
DG4:F.O6/1 2.99 616:D/1 2.71 HIS369:D.ND1/1
DC6:F.N4/1 3.02 212:F/1 3.2 ASP396:D.OD2/1
DC7:F.OP2/1 2.62 208:F/1 3.18 SER425:D.OG/1
DG10:F.O6/1 2.49 204:F/1 3.3 ARG430:D.NH1/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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