Show specific contacts
Show all contacts
Hide all contacts
[ Download ]

Nucleic atom dist Protein atom
DA5:T.OP1/1 2.7 TYR39:A.OH/1
DA5:T.OP2/1 2.69 ASN324:A.N/1
DA5:T.OP2/1 2.65 ASN324:A.OD1/1
DT6:T.OP2/1 2.9 LYS86:A.NZ/1
DT6:T.OP2/1 3.15 SER322:A.N/1
DG7:T.OP1/1 3.34 ARG351:A.NH2/1
DG7:T.OP2/1 2.86 GLY320:A.N/1
DG7:T.OP2/1 3.23 GLY320:A.O/1
DA8:T.OP1/1 2.62 LYS317:A.N/1
DA8:T.OP2/1 2.46 THR318:A.OG1/1
DC9:T.OP1/1 3.21 ARG313:A.NH2/1
DC9:T.OP2/1 2.62 LYS317:A.NZ/1
DC3:P.OP1/1 3.36 ARG383:A.NH1/1
DG4:P.OP2/1 3.17 ARG377:A.NH1/1
DT5:P.OP1/1 3.16 LYS261:A.NZ/1
DC6:P.OP1/1 3.09 LEU262:A.N/1
DC6:P.OP2/1 2.8 LYS261:A.N/1
DA7:P.OP1/1 2.87 SER257:A.N/1
DA7:P.OP1/1 2.85 GLY259:A.N/1
DC9:P.OP2/1 2.4 SER113:A.OG/1
DC9:P.O4'/1 3.18 ILE114:A.N/1
DC9:P.O2/1 2.85 ARG111:A.NH1/1
Show specific contacts
Show all contacts
Hide all contacts
[ Download ]
Nucleic atom d_n2w water d_p2w Protein atom
DT6:T.OP1/1 3.14 641:A/1 2.85 LEU89:A.N/1
DC6:P.OP1/1 3.03 630:A/1 2.79 SER257:A.O/1
DC6:P.OP1/1 3.03 630:A/1 2.82 GLY260:A.N/1
DC6:P.OP1/1 3.03 630:A/1 3.32 GLY263:A.N/1
[ Download ]
Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

text