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Nucleic atom dist Protein atom
DG1:C.N2/1 3.22 GLU234:A.OE1/1
DG1:C.N2/1 3.21 GLU234:B.OE1/1
DC2:C.OP2/1 2.63 HIS258:B.NE2/1
DC2:C.O2/1 2.85 ASN256:A.ND2/1
DC2:C.O2/1 2.87 ASN256:B.ND2/1
DT3:C.OP1/1 3.01 GLN266:A.N/1
DT3:C.OP1/1 2.98 GLN266:B.N/1
DT3:C.OP2/1 2.93 THR230:B.N/1
DT3:C.OP2/1 2.64 THR230:B.OG1/1
DC4:C.OP2/1 2.57 LYS229:A.NZ/1
DC4:C.OP2/1 2.58 LYS229:B.NZ/1
DC7:C.OP1/1 3.07 THR239:B.OG1/1
DC7:C.OP1/1 2.96 THR239:A.OG1/1
DT9:C.OP2/1 2.47 ARG294:B.NH1/1
DT9:C.OP2/1 2.9 ARG294:A.NH1/1
DC10:C.OP1/1 3.21 ARG301:A.NH2/1
DG1:D.N2/1 3.21 GLU234:B.OE1/1
DG1:D.N2/1 3.24 GLU234:A.OE1/1
DT2:D.OP2/1 2.64 HIS258:B.NE2/1
DT2:D.OP2/1 2.58 HIS258:A.NE2/1
DT2:D.O2/1 2.85 ASN256:B.ND2/1
DT2:D.O2/1 2.82 ASN256:A.ND2/1
DG3:D.OP1/1 2.99 GLN266:B.N/1
DG3:D.OP1/1 3.4 LYS229:A.N/1
DG3:D.OP1/1 3.01 GLN266:A.N/1
DG3:D.OP2/1 2.9 THR230:A.N/1
DG3:D.OP2/1 2.62 THR230:A.OG1/1
DA4:D.OP2/1 2.56 LYS229:B.NZ/1
DA4:D.OP2/1 2.55 LYS229:A.NZ/1
DA7:D.OP1/1 3.01 THR239:A.OG1/1
DA7:D.OP1/1 3.13 THR239:B.OG1/1
DG9:D.OP2/1 2.87 ARG294:A.NH1/1
DG9:D.OP2/1 2.48 ARG294:B.NH1/1
DT10:D.OP1/1 3.15 ARG301:B.NH2/1
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Nucleic atom d_n2w water d_p2w Protein atom
DG1:C.O5'/1 2.47 101:D/1 2.68 THR228:A.OG1/1
DG1:C.O5'/1 2.58 103:C/1 2.76 THR228:B.OG1/1
DG1:C.N2/1 3.23 101:D/1 2.68 THR228:A.OG1/1
DG1:C.N2/1 3.14 103:C/1 2.76 THR228:B.OG1/1
DC4:C.OP1/1 2.88 532:A/1 2.81 ARG264:A.O/1
DG1:D.O5'/1 2.58 103:C/1 2.76 THR228:B.OG1/1
DG1:D.O5'/1 2.46 101:D/1 2.68 THR228:A.OG1/1
DG1:D.N2/1 3.14 103:C/1 2.76 THR228:B.OG1/1
DG1:D.N2/1 3.23 101:D/1 2.68 THR228:A.OG1/1
DA4:D.OP1/1 2.89 532:A/1 2.81 ARG264:A.O/1
DC8:D.OP1/1 2.6 102:D/1 2.86 GLU290:A.OE2/1
DC8:D.OP1/1 3.15 101:C/1 2.99 PHE237:B.O/1
DC8:D.OP1/1 3.15 101:C/1 3.23 ARG294:B.NH2/1
DC8:D.OP2/1 3.12 529:A/1 2.79 PHE237:A.O/1
DC8:D.OP2/1 3.12 529:A/1 2.97 ARG294:A.NH2/1
DG14:D.N2/1 3.38 104:D/1 2.92 ALA263:A.N/1
DG14:D.N2/1 3.27 105:C/1 2.94 ALA263:B.N/1
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Core number Atoms Action

  Hbonds:

Hbonds service shows hydrogen bonds on the NA-protein interface. One H-bond is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Dist is distance from nucleic atom to protein atom in angstroms (Å).

  W-Bridges:

W-Bridges service shows Water-bridges on the NA-protein interface. One Water-bridge is one line in the table, where:
 Nucleic atom is atom of nucleic acid in Jmol/RasMol format.
 Protein atom is atom of protein in Jmol/RasMol format.
 Water is water molecule.
 d_n2w is distance from nucleic atom to water molecule (Å).
 d_p2w is distance from protein atom to water molecule (Å).

  CluD:

CluD service shows hydrophobic clusters on the NA-protein interface. One Cluster is one line in the table, where:
 Core number is serial number of cluster.
 Atoms is number of detected atoms in the cluster.
© NPIDB team 2003 - 2021

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